RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 H7C0C1 242 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 LYPLA2O95372 231 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 CALB1P05937 261 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ADSSP30520 456 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ATP5OP48047 213 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 EFNA5P52803 228 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ITGA8P53708 1063 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 PSMC1P62191 440 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 BASP1P80723 227 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 KRT81Q14533 505 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 AGBL2Q5U5Z8 902 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 ASAP3Q8TDY4 903 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 RBM41Q96IZ5 413 aaKnown RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
SSU72-202ENST00000359060 BAIAP2L1Q9UHR4 511 aa11.88□□□□□ -0.51
SSU72-202ENST00000359060 DDX3YO15523 660 aaKnown RBP11.87□□□□□ -0.51
SSU72-202ENST00000359060 NAMPTP43490 491 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
SSU72-202ENST00000359060 BRAFP15056 766 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 CORO7P57737 925 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 ZBTB16Q05516 673 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 PPATQ06203 517 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 SURF1Q15526 300 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 SMTNL2Q2TAL5 461 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 BBS9Q3SYG4 887 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 TRPM4Q8TD43 1214 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 CHMP6Q96FZ7 201 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 BORCS6Q96GS4 357 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 OSBPP22059 807 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 CLCN3P51790 818 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 MYL6P60660 151 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 VSIG1Q86XK7 387 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 TRAPPC12Q8WVT3 735 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 MMP19Q99542 508 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
SSU72-202ENST00000359060 KIAA0391O15091 583 aaKnown RBP11.86□□□□□ -0.51
SSU72-202ENST00000359060 FAM107AO95990 144 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 ARSEP51690 589 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 GCNT1Q02742 428 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 FBXW10Q5XX13 1052 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 MREGQ8N565 214 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 XPO6Q96QU8 1125 aaKnown RBP11.86□□□□□ -0.51
SSU72-202ENST00000359060 PRMT1Q99873 361 aaKnown RBP11.86□□□□□ -0.51
SSU72-202ENST00000359060 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
SSU72-202ENST00000359060 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 GGT7Q9UJ14 662 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 PCDHA3Q9Y5H8 950 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 SHBGP04278 402 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 SETDB1Q15047 1291 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 P3H1Q32P28 736 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 FAM47EQ6ZV65 393 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 SLFN11Q7Z7L1 901 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 C12orf56Q8IXR9 622 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 FEZF2Q8TBJ5 459 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RAPGEF5Q92565 580 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RASA4BC9J798 803 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RASA4O43374 803 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 MED7O43513 233 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 CLTAP09496 248 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 GLRA2P23416 452 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RFC5P40937 340 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 FNTAP49354 379 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 DLK2Q6UY11 383 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 PPP1R21Q6ZMI0 780 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 ITIH2P19823 946 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 BSPRYQ5W0U4 402 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 PPP1R2P3Q6NXS1 205 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 ZNF677Q86XU0 584 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 RBM15Q96T37 977 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■■□□ 14.7
SSU72-202ENST00000359060 STK38LQ9Y2H1 464 aa11.86□□□□□ -0.51
SSU72-202ENST00000359060 SYNJ2BP-COX16A0A087WUM0 186 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 M0QYV0 167 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSU72-202ENST00000359060 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
SSU72-202ENST00000359060 KRT3P12035 628 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 SKOR1P84550 965 aa11.85□□□□□ -0.51
SSU72-202ENST00000359060 TDRD10Q5VZ19 366 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms