RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ABHD16BQ9H3Z7 469 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 KIAA1586Q9HCI6 787 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ALG6Q9Y672 507 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ATXN2Q99700 1313 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 H0YGN5 161 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ADCY6O43306 1168 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ZC3H11AO75152 810 aaKnown RBP eCLIP15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 GGPS1O95749 300 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 MYZAPP0CAP1 466 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 SCP2P22307 547 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 GBP1P32455 592 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 STRN3Q13033 797 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 C15orf39Q6ZRI6 1047 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 SEPT14Q6ZU15 432 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 B4GALNT4Q76KP1 1039 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 TATDN2Q93075 761 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 NFS1Q9Y697 457 aa15.29■□□□□ 0.04
NIPAL3-203ENST00000358028 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 ERLIN2O94905 339 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 CYP1A2P05177 515 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 GCNT1Q02742 428 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 PSMD6Q15008 389 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 CEP85LQ5SZL2 805 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 AGBL2Q5U5Z8 902 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 ENOSF1Q7L5Y1 443 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 ALG3Q92685 438 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 FAM81BQ96LP2 452 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 PDGFCQ9NRA1 345 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 STYXL1Q9Y6J8 313 aa15.28■□□□□ 0.04
NIPAL3-203ENST00000358028 IGKV6D-21A0A0A0MT36 114 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 LOC102724159A0A0B4J2E5 919 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 TTI1O43156 1089 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ATMINO43313 823 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 PIGRP01833 764 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 AKR1A1P14550 325 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 GLRA2P23416 452 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ARL2P36404 184 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 NAMPTP43490 491 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 CLDN10P78369 228 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 PWP2Q15269 919 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 NAA35Q5VZE5 725 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 SH2D3CQ8N5H7 860 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 DDX1Q92499 740 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ZNF516Q92618 1163 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ZNF653Q96CK0 615 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 NIFKQ9BYG3 293 aaKnown RBP15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 C1orf112Q9NSG2 853 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 RASAL2Q9UJF2 1139 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 GTF3C4Q9UKN8 822 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 OGDHLQ9ULD0 1010 aa15.27■□□□□ 0.04
NIPAL3-203ENST00000358028 DAPK3O43293 454 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 MSCO60682 206 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 CTNNA1P35221 906 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 ADCYAP1R1P41586 468 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 CCT5P48643 541 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 EIF3BP55884 814 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 DR1Q01658 176 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 MESDQ14696 234 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 UAP1Q16222 522 aaPredicted RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 TMEM63BQ5T3F8 832 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 TAPT1Q6NXT6 567 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 C10orf67Q8IYJ2 551 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 ZNF564Q8TBZ8 553 aaPredicted RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 ELMO3Q96BJ8 720 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 CEP89Q96ST8 783 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 PI4K2AQ9BTU6 479 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 NUP85Q9BW27 656 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 EPN3Q9H201 632 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 NEUROG2Q9H2A3 272 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 VTA1Q9NP79 307 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 AGO2Q9UKV8 859 aaKnown RBP15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 GSTTP1A0A1W2PQM5 241 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 LRRIQ4A6NIV6 560 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 PPFIA2O75334 1257 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 SLC34A2O95436 690 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 KRT5P13647 590 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 COMTP21964 271 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 LSP1P33241 339 aa15.26■□□□□ 0.03
NIPAL3-203ENST00000358028 MDH1P40925 334 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms