RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 RGS9BPQ6ZS82 235 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 TRIM74Q86UV6 250 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 TRIM73Q86UV7 250 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 ATL2Q8NHH9 583 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 MAK16Q9BXY0 300 aaKnown RBP20.02■□□□□ 0.8
PRPF39-201ENST00000355765 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 LAMB2P55268 1798 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 FAM86B1E9PN63 330 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 CHMP2AO43633 222 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 CREB3O43889 395 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 MTA2O94776 668 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 FAM86B2P0C5J1 330 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 SNHG28P0DPA3 235 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 GJC1P36383 396 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 SCNN1BP51168 640 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 ZBTB16Q05516 673 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 PPP3CAQ08209 521 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 P3H1Q32P28 736 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 TBC1D9BQ66K14 1250 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 GSTA5Q7RTV2 222 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 GRK7Q8WTQ7 553 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 PTCD3Q96EY7 689 aaKnown RBP20.02■□□□□ 0.8
PRPF39-201ENST00000355765 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
PRPF39-201ENST00000355765 MKNK1Q9BUB5 465 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 STX18Q9P2W9 335 aaKnown RBP20.02■□□□□ 0.8
PRPF39-201ENST00000355765 ANAPC7Q9UJX3 599 aa20.02■□□□□ 0.8
PRPF39-201ENST00000355765 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 LDHCP07864 332 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 TROVE2P10155 538 aaKnown RBP eCLIP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SERPINB3P29508 390 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SIK1P57059 783 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 C2CD6Q53TS8 623 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 LLGL2Q6P1M3 1020 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 TTC7BQ86TV6 843 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 TPH2Q8IWU9 490 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 PLVAPQ9BX97 442 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 NOCTQ9UK39 431 aaKnown RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 GOLGA8RI6L899 631 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 KCNQ2O43526 872 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 FMO1Q01740 532 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 TCEAL1Q15170 157 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 IZUMO2Q6UXV1 221 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 OPTNQ96CV9 577 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 NSL1Q96IY1 281 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 KLF6Q99612 283 aaPredicted RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 NAP1L4Q99733 375 aaKnown RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 TAS2R1Q9NYW7 299 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 NRAPQ86VF7 1730 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 DOT1LQ8TEK3 1739 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 CYP1A2P05177 515 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 RALAP11233 206 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 NR1H3Q13133 447 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 QRICH1Q2TAL8 776 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 FAM178BQ8IXR5 827 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 PPM1KQ8N3J5 372 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 GLIS1Q8NBF1 620 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 AZIN2Q96A70 460 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 CFAP57Q96MR6 1250 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 CDCA7Q9BWT1 371 aaPredicted RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SPATA16Q9BXB7 569 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 FAM192AQ9GZU8 254 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 ANKFY1Q9P2R3 1169 aa20.01■□□□□ 0.79
PRPF39-201ENST00000355765 SMG5Q9UPR3 1016 aaKnown RBP20.01■□□□□ 0.79
PRPF39-201ENST00000355765 C10orf71Q711Q0 1435 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 EIF3DO15371 548 aaKnown RBP eCLIP20■□□□□ 0.79
PRPF39-201ENST00000355765 KRT4P19013 534 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 RIBC1Q8N443 379 aaPredicted RBP20■□□□□ 0.79
PRPF39-201ENST00000355765 ZSWIM2Q8NEG5 633 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 CYTH2Q99418 400 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 PARVGQ9HBI0 331 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 ARMCX1Q9P291 453 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 SEC23IPQ9Y6Y8 1000 aaKnown RBP20■□□□□ 0.79
PRPF39-201ENST00000355765 BANF1O75531 89 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 ZWINTO95229 277 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 ZSCAN5DPP0CG00 497 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 BMP3P12645 472 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 GAP43P17677 238 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 MAPK4P31152 587 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 NOVP48745 357 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 SYDE1Q6ZW31 735 aaPredicted RBP20■□□□□ 0.79
PRPF39-201ENST00000355765 FAM161BQ96MY7 647 aa20■□□□□ 0.79
PRPF39-201ENST00000355765 KCNQ4P56696 695 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 SEPT7Q16181 437 aaKnown RBP19.99■□□□□ 0.79
PRPF39-201ENST00000355765 LRRC6Q86X45 466 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 LENG9Q96B70 501 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 DMAC2Q9NW81 257 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 GTF3C4Q9UKN8 822 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 CYP3A7-CYP3A51PA0A087WV96 503 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 MSH4O15457 936 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 TYROBPO43914 113 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 USP1O94782 785 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 ESRRAP11474 423 aaPredicted RBP19.99■□□□□ 0.79
PRPF39-201ENST00000355765 CYP3A7P24462 503 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 RASA3Q14644 834 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 EPC2Q52LR7 807 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 ODR4Q5SWX8 454 aa19.99■□□□□ 0.79
PRPF39-201ENST00000355765 ZNF720Q7Z2F6 126 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms