RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 LRIG3Q6UXM1 1119 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 LONP2Q86WA8 852 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 IFT20Q8IY31 132 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 HIC2Q96JB3 615 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
SND1-201ENST00000354725 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 CCT8L1PA6NM43 557 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 PALMO75781 387 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 GLULP15104 373 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 TNNI2P48788 182 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 CENPAP49450 140 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 LSAMPQ13449 338 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 MAP7Q14244 749 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 PRCCQ92733 491 aaPredicted RBP11.49□□□□□ -0.57
SND1-201ENST00000354725 ABTB1Q969K4 478 aaPredicted RBP11.49□□□□□ -0.57
SND1-201ENST00000354725 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 TTLL3Q9Y4R7 772 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 ALDH2P05091 517 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 HOXD13P35453 343 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 GJA5P36382 358 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 TXKP42681 527 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 GEMIN4P57678 1058 aaKnown RBP11.49□□□□□ -0.57
SND1-201ENST00000354725 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
SND1-201ENST00000354725 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 RUFY4Q6ZNE9 571 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 FERD3LQ96RJ6 166 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 TBCBQ99426 244 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
SND1-201ENST00000354725 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
SND1-201ENST00000354725 A0A087X0T9 212 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 KDM1AO60341 852 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 PAEPP09466 180 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 FAM228BP0C875 321 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 BPIFB3P59826 476 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 ARSHQ5FYA8 562 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 RBM20Q5T481 1227 aaKnown RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 DAAM2Q86T65 1068 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 PI4KBQ9UBF8 816 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SLC12A6Q9UHW9 1150 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 CARD8Q9Y2G2 431 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 HTTP42858 3142 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 ZSCAN5CA6NGD5 496 aaPredicted RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 HSPA8P11142 646 aaKnown RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 NQO1P15559 274 aaKnown RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 ALDH5A1P51649 535 aaPredicted RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 ADCY7P51828 1080 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 PICALMQ13492 652 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 UAP1Q16222 522 aaPredicted RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 GRAMD4Q6IC98 578 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SMC6Q96SB8 1091 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 MMRN2Q9H8L6 949 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 TTC7AQ9ULT0 858 aaPredicted RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 STX8Q9UNK0 236 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 A0A0A6YYK5 440 aaPredicted RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 TRAPPC3O43617 180 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
SND1-201ENST00000354725 KRT14P02533 472 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 CSRNP1Q96S65 589 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 SCOCQ9UIL1 159 aa11.48□□□□□ -0.57
SND1-201ENST00000354725 KDM3AQ9Y4C1 1321 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 ARHGEF6Q15052 776 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 RASA2Q15283 850 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 CNPY1Q3B7I2 92 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 GKAP1Q5VSY0 366 aaPredicted RBP11.47□□□□□ -0.57
SND1-201ENST00000354725 MOXD1Q6UVY6 613 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 SIKE1Q9BRV8 207 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 RAB34Q9BZG1 259 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 MRPL46Q9H2W6 279 aaKnown RBP11.47□□□□□ -0.57
SND1-201ENST00000354725 TMBIM4Q9HC24 238 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
SND1-201ENST00000354725 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
SND1-201ENST00000354725 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 HEXIM1O94992 359 aaKnown RBP11.47□□□□□ -0.57
SND1-201ENST00000354725 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
SND1-201ENST00000354725 SERPINB4P48594 390 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms