RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 DEPDC1BQ8WUY9 529 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
RTN3-204ENST00000354497 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 TSPYL1Q9H0U9 437 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
RTN3-204ENST00000354497 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
RTN3-204ENST00000354497 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 BAHCC1Q9P281 2608 aa12.33□□□□□ -0.44
RTN3-204ENST00000354497 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 USO1O60763 962 aaKnown RBP12.32□□□□□ -0.44
RTN3-204ENST00000354497 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 HOXC13P31276 330 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 CLCNKBP51801 687 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 FOXC1Q12948 553 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 NAB2Q15742 525 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 IQCEQ6IPM2 695 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 TICRRQ7Z2Z1 1910 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
RTN3-204ENST00000354497 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 GOLGA2P5Q9HBQ8 144 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 C2orf42Q9NWW7 574 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
RTN3-204ENST00000354497 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 A0A087WWV3 80 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 ARHGEF37A1IGU5 675 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 HEPACAM2A8MVW5 462 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 M0R2N6 131 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 CPLX1O14810 134 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 BAG4O95429 457 aaKnown RBP12.31□□□□□ -0.44
RTN3-204ENST00000354497 PXNP49023 591 aaPredicted RBP12.31□□□□□ -0.44
RTN3-204ENST00000354497 PRPF4BQ13523 1007 aaKnown RBP12.31□□□□□ -0.44
RTN3-204ENST00000354497 WDR5BQ86VZ2 330 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 HAS1Q92839 578 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 ZNF512Q96ME7 567 aaPredicted RBP12.31□□□□□ -0.44
RTN3-204ENST00000354497 AIFM3Q96NN9 605 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
RTN3-204ENST00000354497 TRPV5Q9NQA5 729 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 ASAH2Q9NR71 780 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 INSL5Q9Y5Q6 135 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 COL4A2P08572 1712 aa12.31□□□□□ -0.44
RTN3-204ENST00000354497 NCANO14594 1321 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 RPP40O75818 363 aaKnown RBP12.3□□□□□ -0.44
RTN3-204ENST00000354497 SLITRK3O94933 977 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 EPN2O95208 641 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 DEXIO95424 95 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 SEC24AO95486 1093 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 ZNF806P0C7X5 589 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 GCFC2P16383 781 aaKnown RBP12.3□□□□□ -0.44
RTN3-204ENST00000354497 SPINK2P20155 84 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
RTN3-204ENST00000354497 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
RTN3-204ENST00000354497 FAM193AP78312 1265 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 TWF1Q12792 350 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 PON2Q15165 354 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 TEAD2Q15562 447 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 DGKKQ5KSL6 1271 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 RNF43Q68DV7 783 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 KBTBD6Q86V97 674 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 MFSD6LQ8IWD5 586 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
RTN3-204ENST00000354497 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 VWA8A3KMH1 1905 aa12.3□□□□□ -0.44
RTN3-204ENST00000354497 SPECC1L-ADORA2AF8WAN1 911 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 TM4SF5O14894 197 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
RTN3-204ENST00000354497 MICAL2O94851 1124 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 PAPSS2O95340 614 aaPredicted RBP12.29□□□□□ -0.44
RTN3-204ENST00000354497 RPS6KB1P23443 525 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 ZNF252P-AS1Q0IIN9 211 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 TCEAL6Q6IPX3 200 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 TCEAL3Q969E4 200 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 UROC1Q96N76 676 aa12.29□□□□□ -0.44
RTN3-204ENST00000354497 NAP1L4Q99733 375 aaKnown RBP12.29□□□□□ -0.44
RTN3-204ENST00000354497 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
RTN3-204ENST00000354497 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
RTN3-204ENST00000354497 H7C4K7 107 aa12.28□□□□□ -0.44
RTN3-204ENST00000354497 DPYSL4O14531 572 aa12.28□□□□□ -0.44
RTN3-204ENST00000354497 EXTL3O43909 919 aa12.28□□□□□ -0.44
RTN3-204ENST00000354497 MOSPD3O75425 235 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms