RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SEMA6BQ9H3T3 888 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 FAM49BQ9NUQ9 324 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 RARBP10826 455 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 LSP1P33241 339 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 RPS6P62753 249 aaKnown RBP16.86■□□□□ 0.29
PTPN11-201ENST00000351677 GPAT2Q6NUI2 795 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 GIPC2Q8TF65 315 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 TARS2Q9BW92 718 aaKnown RBP16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ZBBXA8MT70 800 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 EXTL3O43909 919 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ITGA8P53708 1063 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 CENPKQ9BS16 269 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 SENP1Q9P0U3 644 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 APPL2Q8NEU8 664 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ACER1Q8TDN7 264 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ACSF2Q96CM8 615 aaPredicted RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 WDR35Q9P2L0 1181 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 CHMP2BQ9UQN3 213 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 IGSF9BQ9UPX0 1349 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 HADHAP40939 763 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 SEC24CP53992 1094 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ST3GAL1Q11201 340 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 CYP4A22Q5TCH4 519 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 UBA3Q8TBC4 463 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ZC3H7BQ9UGR2 993 aaKnown RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 E5RI56 91 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 CASP4P49662 377 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 AP2B1P63010 937 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ATF7IP2Q5U623 682 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 FBXW10Q5XX13 1052 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 SLC26A7Q8TE54 656 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 LBHD1Q9BQE6 289 aaPredicted RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 KDSRQ06136 332 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 SEZ6Q53EL9 994 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
PTPN11-201ENST00000351677 ARHGEF26Q96DR7 871 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 PACSIN1Q9BY11 444 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 CAPN6Q9Y6Q1 641 aa16.85■□□□□ 0.29
PTPN11-201ENST00000351677 EFTUD2Q15029 972 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 PKN1Q16512 942 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 GGA3Q9NZ52 723 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 LMCD1Q9NZU5 365 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 NAGPAQ9UK23 515 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 TBX20Q9UMR3 447 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 AK9Q5TCS8 1911 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 CPB1P15086 417 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 CDR2LQ86X02 465 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 KBTBD4Q9NVX7 518 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 PRKAG2Q9UGJ0 569 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 DYNC1LI2O43237 492 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 CCDC22O60826 627 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 ENO1P06733 434 aaKnown RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 CUL3Q13618 768 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 AGBL2Q5U5Z8 902 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 ZNF710Q8N1W2 664 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 USP33Q8TEY7 942 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 KLF6Q99612 283 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 SMG5Q9UPR3 1016 aaKnown RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 TRIM66O15016 1216 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 MARCOQ9UEW3 520 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 STMN1P16949 149 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 RFC5P40937 340 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 IMPG1Q17R60 797 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 SEC16BQ96JE7 1060 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 EPAS1Q99814 870 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
PTPN11-201ENST00000351677 PSMC3IPQ9P2W1 217 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-201ENST00000351677 FOXN3O00409 490 aaPredicted RBP16.83■□□□□ 0.29
PTPN11-201ENST00000351677 RALAP11233 206 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 GRIK1P39086 918 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 MAGEA4P43358 317 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 RNF219Q5W0B1 726 aaPredicted RBP16.83■□□□□ 0.29
PTPN11-201ENST00000351677 EFCAB12Q6NXP0 572 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 CASKIN2Q8WXE0 1202 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 TCRBV5S4A2TA0A5A2 114 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 FOXP2O15409 715 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 SGPL1O95470 568 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 CTSHP09668 335 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 INPP1P49441 399 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 HERVK_113P62684 666 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 SLC29A2Q14542 456 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 RNF217Q8TC41 542 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 ABTB1Q969K4 478 aaPredicted RBP16.83■□□□□ 0.29
PTPN11-201ENST00000351677 WWP1Q9H0M0 922 aa16.83■□□□□ 0.29
PTPN11-201ENST00000351677 TMEM120BA0PK00 339 aa16.83■□□□□ 0.28
PTPN11-201ENST00000351677 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-201ENST00000351677 SPATA18Q8TC71 538 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms