RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 SYDE1Q6ZW31 735 aaPredicted RBP18.88■□□□□ 0.61
VHL-202ENST00000345392 GSTA5Q7RTV2 222 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 DENND1AQ8TEH3 1009 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 CPA5Q8WXQ8 436 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 VTI1AQ96AJ9 217 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 FAM84AQ96KN4 292 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 SYT15Q9BQS2 421 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 TRABDQ9H4I3 376 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 SAYSD1Q9NPB0 183 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 NEU2Q9Y3R4 380 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 P4HA2O15460 535 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 FGFR1P11362 822 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 ATP6V1C1P21283 382 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 SPARCL1Q14515 664 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 FASTKD3Q14CZ7 662 aaKnown RBP18.87■□□□□ 0.61
VHL-202ENST00000345392 SLC1A5Q15758 541 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 P3H1Q32P28 736 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 CBWD2Q8IUF1 395 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 DDX1Q92499 740 aaKnown RBP18.87■□□□□ 0.61
VHL-202ENST00000345392 NUMBLQ9Y6R0 609 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 MAGEB2O15479 319 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 KRT5P13647 590 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 ALDH3A1P30838 453 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 LMNTD2Q8IXW0 634 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 KCTD17Q8N5Z5 321 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 GLIS1Q8NBF1 620 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 ASAP3Q8TDY4 903 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 INPP5DQ92835 1189 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 DDX27Q96GQ7 796 aaKnown RBP18.87■□□□□ 0.61
VHL-202ENST00000345392 SH3GL3Q99963 347 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 TOPORSQ9NS56 1045 aaPredicted RBP18.87■□□□□ 0.61
VHL-202ENST00000345392 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 EDF1O60869 148 aaKnown RBP18.87■□□□□ 0.61
VHL-202ENST00000345392 DCTN3O75935 186 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 CA4P22748 312 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 MAN1A1P33908 653 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 RFWD3Q6PCD5 774 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 HELQQ8TDG4 1101 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 C10orf82Q8WW14 230 aa18.87■□□□□ 0.61
VHL-202ENST00000345392 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 A0A1W2PPM1 405 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 SMIM24O75264 130 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 ZSCAN5DPP0CG00 497 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 MXRA7P84157 204 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 ANKRD27Q96NW4 1050 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 ACCSQ96QU6 501 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 TMEM206Q9H813 350 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 LARSQ9P2J5 1176 aaKnown RBP18.86■□□□□ 0.61
VHL-202ENST00000345392 PIAS1O75925 651 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 POTEJP0CG39 1038 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 MYBPC2Q14324 1141 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 KHDC1Q4VXA5 237 aaKnown RBP18.86■□□□□ 0.61
VHL-202ENST00000345392 MTDHQ86UE4 582 aaKnown RBP18.86■□□□□ 0.61
VHL-202ENST00000345392 DNAJC9Q8WXX5 260 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 PIDD1Q9HB75 910 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 NPHS2Q9NP85 383 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 UBN1Q9NPG3 1134 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 KCND2Q9NZV8 630 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 ZBTB21Q9ULJ3 1066 aa18.86■□□□□ 0.61
VHL-202ENST00000345392 ANKRD31Q8N7Z5 1873 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 LRRD1A4D1F6 860 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 WDR91A4D1P6 747 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 TMEM150BA6NC51 233 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 SSR1P43307 286 aaKnown RBP18.85■□□□□ 0.61
VHL-202ENST00000345392 PDK4Q16654 411 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 CEP55Q53EZ4 464 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 TMEM154Q6P9G4 183 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 OTOAQ7RTW8 1153 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 APBB1IPQ7Z5R6 666 aaPredicted RBP18.85■□□□□ 0.61
VHL-202ENST00000345392 TAS1R2Q8TE23 839 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 MAIP1Q8WWC4 291 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 SMC6Q96SB8 1091 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 PI4K2AQ9BTU6 479 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 KLHL11Q9NVR0 708 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 ZFP69BQ9UJL9 534 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 SCN9AQ15858 1988 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 E7ENQ6 273 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 ECE2O60344 883 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 AP1G2O75843 785 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 FDX1P10109 184 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 CD58P19256 250 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 KLF1Q13351 362 aaPredicted RBP18.85■□□□□ 0.61
VHL-202ENST00000345392 CLEC16AQ2KHT3 1053 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 MUM1Q2TAK8 710 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 PLEKHG4Q58EX7 1191 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.85■□□□□ 0.61
VHL-202ENST00000345392 ENDOVQ8N8Q3 282 aaKnown RBP18.85■□□□□ 0.61
VHL-202ENST00000345392 TSC22D3Q99576 134 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 FHDC1Q9C0D6 1143 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms