RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 NEUROD4Q9HD90 331 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 ARHGEF3Q9NR81 526 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 EMSYQ7Z589 1322 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 VTNP04004 478 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 MMEP08473 750 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP19A1P11511 503 aaPredicted RBP12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 CLEC4FQ8N1N0 589 aa12.86□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM47E-STBD1D6RA91 191 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF445P59923 1031 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 LRRC36Q1X8D7 754 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 HORMAD1Q86X24 394 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 SP8Q8IXZ3 490 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF555Q8NEP9 628 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TMEM245Q9H330 911 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 STARD7Q9NQZ5 370 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF711Q9Y462 761 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 CTIFO43310 598 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 APRTP07741 180 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ALCAMQ13740 583 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TRIM62Q9BVG3 475 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM129AQ9BZQ8 928 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 PARVBQ9HBI1 364 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 NR1D1P20393 614 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ORC1Q13415 861 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ZC3H15Q8WU90 426 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 IP6K2Q9UHH9 426 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 SLC30A1Q9Y6M5 507 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 JCADQ9P266 1359 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 AVPR1AP37288 418 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ARSEP51690 589 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 SEZ6Q53EL9 994 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 ASCC2Q9H1I8 757 aaPredicted RBP12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 KRT38O76015 456 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 SMTNL2Q2TAL5 461 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 RAD54LQ92698 747 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 NAGPAQ9UK23 515 aa12.85□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP26A1O43174 497 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 DAB1O75553 588 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP7B1O75881 506 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 LARGE1O95461 756 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 KLRC2P26717 231 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 RPS7P62081 194 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 TMEM132DQ14C87 1099 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 LINC00854A0A1B0GVQ3 168 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 TDP2O95551 362 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CCNE1P24864 410 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 HARS2P49590 506 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CDH18Q13634 790 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 FAM135BQ49AJ0 1406 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CHRM3P20309 590 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 DDX39BQ13838 428 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 KRT76Q01546 638 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 KLHL24Q6TFL4 600 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 ZNF560Q96MR9 790 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 ANGPT2O15123 496 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 DGKIO75912 1065 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 PRCPP42785 496 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 TFDP2Q14188 446 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 NCAPHQ15003 741 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 PCDH8O95206 1070 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 CYP2C9P11712 490 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 ATP1A3P13637 1013 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 SH3BP5LQ7L8J4 393 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 EXD1Q8NHP7 514 aa12.84□□□□□ -0.35
TRIOBP-202ENST00000344404 TNIP3Q96KP6 325 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms