RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 AKR1A1P14550 325 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 PSMC4P43686 418 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 ZNF132P52740 706 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 ADAM17P78536 824 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 CDC42EP1Q00587 391 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 SLC10A6Q3KNW5 377 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 XYLT2Q9H1B5 865 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 GTF3C4Q9UKN8 822 aa21.39■■□□□ 1.01
RTN1-202ENST00000342503 ZRANB2O95218 330 aaKnown RBP eCLIP21.38■■□□□ 1.01
RTN1-202ENST00000342503 CYP1A1P04798 512 aaPredicted RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 CFHP08603 1231 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 FCGRTP55899 365 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 RNASE9P60153 205 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 FSCN1Q16658 493 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 CYP4F22Q6NT55 531 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 C11orf63Q6NUN7 778 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 WDR93Q6P2C0 686 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 TMEM130Q8N3G9 435 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 SMC1BQ8NDV3 1235 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 HHIPL1Q96JK4 782 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 ADPGKQ9BRR6 497 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 SELENOOQ9BVL4 669 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 NUP85Q9BW27 656 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 ASB7Q9H672 318 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 GPBP1L1Q9HC44 474 aaPredicted RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 RBM12Q9NTZ6 932 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 SIX4Q9UIU6 781 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 GABRQQ9UN88 632 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 TARSL2A2RTX5 802 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 DDX3YO15523 660 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 TREHO43280 583 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CEP104O60308 925 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 TUBBP07437 444 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 KRT19P08727 400 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CD58P19256 250 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 ZNF200P98182 395 aaPredicted RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 C1orf127Q8N9H9 656 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 DNAJB3Q8WWF6 145 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CPA5Q8WXQ8 436 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CYFIP2Q96F07 1278 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 ACAP3Q96P50 834 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 OSMRQ99650 979 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 KATNAL1Q9BW62 490 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CCDC94Q9BW85 323 aaPredicted RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 ARFGAP3Q9NP61 516 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CISHQ9NSE2 258 aa21.38■■□□□ 1.01
RTN1-202ENST00000342503 CNOT8Q9UFF9 292 aaKnown RBP21.38■■□□□ 1.01
RTN1-202ENST00000342503 MROH7Q68CQ1 1323 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 TMEM110-MUSTN1A8MSY1 372 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 KIF3CO14782 793 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 THAP12O43422 761 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 NPTXRO95502 500 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 SSTR3P32745 418 aaPredicted RBP21.37■■□□□ 1.01
RTN1-202ENST00000342503 ASPAP45381 313 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 NAA35Q5VZE5 725 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 SCARA5Q6ZMJ2 495 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 TRIM72Q6ZMU5 477 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 CATSPER4Q7RTX7 472 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 MCOLN2Q8IZK6 566 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 ZNF564Q8TBZ8 553 aaPredicted RBP21.37■■□□□ 1.01
RTN1-202ENST00000342503 LRRC1Q9BTT6 524 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 POLIQ9UNA4 740 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 ALG6Q9Y672 507 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 RALGAPA2Q2PPJ7 1873 aa21.37■■□□□ 1.01
RTN1-202ENST00000342503 MYADML2A6NDP7 307 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 DUSP11O75319 330 aaKnown RBP21.36■■□□□ 1.01
RTN1-202ENST00000342503 HOXA11P31270 313 aaPredicted RBP21.36■■□□□ 1.01
RTN1-202ENST00000342503 GRM5P41594 1212 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 PURAQ00577 322 aaKnown RBP21.36■■□□□ 1.01
RTN1-202ENST00000342503 CENPCQ03188 943 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 MESDQ14696 234 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 DCAF4L1Q3SXM0 396 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 CCDC70Q6NSX1 233 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 PASD1Q8IV76 773 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 USP38Q8NB14 1042 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 ACTRT1Q8TDG2 376 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 HNRNPLLQ8WVV9 542 aaKnown RBP21.36■■□□□ 1.01
RTN1-202ENST00000342503 TRIB2Q92519 343 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 UVRAGQ9P2Y5 699 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 TRIP11Q15643 1979 aa21.36■■□□□ 1.01
RTN1-202ENST00000342503 C17orf102A2RUQ5 167 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 ITGB3P05106 788 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 WEE2P0C1S8 567 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 CYBAP13498 195 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 DARSP14868 501 aaKnown RBP21.35■■□□□ 1.01
RTN1-202ENST00000342503 TMEM132DQ14C87 1099 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 CXorf38Q8TB03 319 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 NXF1Q9UBU9 619 aaKnown RBP21.35■■□□□ 1.01
RTN1-202ENST00000342503 ERLIN1O75477 346 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 NSFP46459 744 aaKnown RBP21.35■■□□□ 1.01
RTN1-202ENST00000342503 LACTBP83111 547 aaPredicted RBP21.35■■□□□ 1.01
RTN1-202ENST00000342503 MFSD14CQ5VZR4 134 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 RASGEF1CQ8N431 466 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 ZNF606Q8WXB4 792 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 BTBD6Q96KE9 485 aa21.35■■□□□ 1.01
RTN1-202ENST00000342503 ALDH1A1P00352 501 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 C6orf222P0C671 652 aaPredicted RBP21.34■■□□□ 1.01
RTN1-202ENST00000342503 FLT3LGP49771 235 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 NOMO3P69849 1222 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 LONRF2Q1L5Z9 754 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms