RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 RIN2Q8WYP3 895 aaPredicted RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 ZNF516Q92618 1163 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 CGRRF1Q99675 332 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 DUSP9Q99956 384 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 KIAA1586Q9HCI6 787 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 C2CD2Q9Y426 696 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 SYCE3A1L190 88 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 SPTLC1O15269 473 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 PHACTR2O75167 634 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 URODP06132 367 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.13
TUBD1-202ENST00000340993 KRT13P13646 458 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.13
TUBD1-202ENST00000340993 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.13
TUBD1-202ENST00000340993 CCDC40Q4G0X9 1142 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 TTI2Q6NXR4 508 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 SLC9A9Q8IVB4 645 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 RSPH1Q8WYR4 309 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 MFSD14AQ96MC6 490 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 UROC1Q96N76 676 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 SRRTQ9BXP5 876 aaKnown RBP14.27□□□□□ -0.13
TUBD1-202ENST00000340993 ZBP1Q9H171 429 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 INTS13Q9NVM9 706 aa14.27□□□□□ -0.13
TUBD1-202ENST00000340993 PLXNA3P51805 1871 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 LINC01565O15544 149 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 SOD2P04179 222 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 GCLMP48507 274 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 GLUD2P49448 558 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 VAMP7P51809 220 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 ARPP19P56211 112 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
TUBD1-202ENST00000340993 CLUL1Q15846 466 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 CACTINQ8WUQ7 758 aaKnown RBP14.26□□□□□ -0.13
TUBD1-202ENST00000340993 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
TUBD1-202ENST00000340993 MED15Q96RN5 788 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 DNAJC25Q9H1X3 360 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 SIX4Q9UIU6 781 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
TUBD1-202ENST00000340993 A0A0C4DFX4 3053 aa14.26□□□□□ -0.13
TUBD1-202ENST00000340993 BICDL2A1A5D9 508 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 C2orf71A6NGG8 1288 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 SPATA31D3P0C874 917 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
TUBD1-202ENST00000340993 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 KLHL40Q2TBA0 621 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
TUBD1-202ENST00000340993 SPATA31D4Q6ZUB0 917 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 TRAPPC11Q7Z392 1133 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 WDR49Q8IV35 697 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 PARD3BQ8TEW8 1205 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 HERC2P3Q9BVR0 1158 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 NSUN3Q9H649 340 aaKnown RBP14.25□□□□□ -0.13
TUBD1-202ENST00000340993 TLE6Q9H808 572 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 DERAQ9Y315 318 aa14.25□□□□□ -0.13
TUBD1-202ENST00000340993 CST3P01034 146 aaPredicted RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 CTSAP10619 480 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 CYP3A5P20815 502 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 LRPAP1P30533 357 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 RPL9P32969 192 aaKnown RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 LILRA4P59901 499 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 TYRO3Q06418 890 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 USP41Q3LFD5 358 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 SCARA5Q6ZMJ2 495 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 PALB2Q86YC2 1186 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 PI4K2AQ9BTU6 479 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 TTPALQ9BTX7 342 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 MRPL17Q9NRX2 175 aaKnown RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 TSC2P49815 1807 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 PIRO00625 290 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 FSCN2O14926 492 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 ADAM12O43184 909 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 LRRN2O75325 713 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 TAF6P49848 677 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 UBE3AQ05086 875 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 PPP3CAQ08209 521 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 HYAL1Q12794 435 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 TRPC3Q13507 836 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 SURF1Q15526 300 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 STX1AQ16623 288 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 C1orf220Q5T0J3 134 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 RBM43Q6ZSC3 357 aaKnown RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
TUBD1-202ENST00000340993 CLDND1Q9NY35 253 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 RWDD2AQ9UIY3 292 aa14.24□□□□□ -0.13
TUBD1-202ENST00000340993 LZTS1Q9Y250 596 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms