RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 KLHDC7AQ5VTJ3 777 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 IQSEC1Q6DN90 963 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 STXBP4Q6ZWJ1 553 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 MAATS1Q7Z4T9 603 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 CBWD2Q8IUF1 395 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 RNF149Q8NC42 400 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 DEPTORQ8TB45 409 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 AGAP11Q8TF27 550 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 KRT12Q99456 494 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 GINS2Q9Y248 185 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 MYCP01106 439 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 PRLRP16471 622 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 CDK17Q00537 523 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 SP3Q02447 781 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 TDRD12Q587J7 1177 aaKnown RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 KDM7AQ6ZMT4 941 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 EBF2Q9HAK2 575 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 HSPBP1Q9NZL4 362 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ZNF200P98182 395 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 LAMTOR4Q0VGL1 99 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 HIC1Q14526 733 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 PLEKHO2Q8TD55 490 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 SEC16BQ96JE7 1060 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 OSBPL1AQ9BXW6 950 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 A0A1W2PQJ5 194 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ADRB2P07550 413 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 MYL3P08590 195 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 SLC9A1P19634 815 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ENOX2Q16206 610 aaKnown RBP16.12■□□□□ 0.17
BRAT1-201ENST00000340611 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ZBTB41Q5SVQ8 909 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ARHGAP22Q7Z5H3 698 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 CASKIN2Q8WXE0 1202 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 CCDC127Q96BQ5 260 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 HAPLN2Q9GZV7 340 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 MINDY3Q9H8M7 445 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 ARHGAP28Q9P2N2 729 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
BRAT1-201ENST00000340611 LAMA2P24043 3122 aaKnown RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 RPL13P26373 211 aaKnown RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 XRCC4Q13426 336 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 PPP1R15BQ5SWA1 713 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 POMGNT1Q8WZA1 660 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 PRCCQ92733 491 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 FAM167AQ96KS9 214 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 NTPCRQ9BSD7 190 aaKnown RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 K7ERI5 159 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 HBP1O60381 514 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 C22orf31O95567 290 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 C6orf222P0C671 652 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 XRCC5P13010 732 aaKnown RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 PAK2Q13177 524 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 DGKDQ16760 1214 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 FIGNQ5HY92 759 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 GJB7Q6PEY0 223 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 OR2W6PQ8NHA6 318 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 RUBCNQ92622 972 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 TIPINQ9BVW5 301 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 TRIM4Q9C037 500 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 FAM49AQ9H0Q0 323 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-201ENST00000340611 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 DMAC2Q9NW81 257 aa16.11■□□□□ 0.17
BRAT1-201ENST00000340611 DPPA5A6NC42 116 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 A6NNZ2 444 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 RNF8O76064 485 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CCND3P30281 292 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-201ENST00000340611 PSMC2P35998 433 aaKnown RBP16.1■□□□□ 0.17
BRAT1-201ENST00000340611 ABL2P42684 1182 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 MXRA7P84157 204 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 PTPROQ16827 1216 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 TUBB8Q3ZCM7 444 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CBWD6Q4V339 395 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 LMBRD2Q68DH5 695 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-201ENST00000340611 MFN1Q8IWA4 741 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 KLHL7Q8IXQ5 586 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 TMEM206Q9H813 350 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 GDF3Q9NR23 364 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-201ENST00000340611 B4GALT5O43286 388 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 IQCF3P0C7M6 154 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 RFC5P40937 340 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 ACOT2P49753 483 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 WNT7BP56706 349 aa16.1■□□□□ 0.17
BRAT1-201ENST00000340611 LRRC23Q53EV4 343 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms