RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 ZFRQ96KR1 1074 aaKnown RBP3.4□□□□□ -1.86
SOCS4-201ENST00000339298 CITED1Q99966 193 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 DBNDD2Q9BQY9 259 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 JAM3Q9BX67 310 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 CUEDC2Q9H467 287 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 SOX17Q9H6I2 414 aaPredicted RBP3.4□□□□□ -1.86
SOCS4-201ENST00000339298 NRDE2Q9H7Z3 1164 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 WDR6Q9NNW5 1121 aaKnown RBP3.4□□□□□ -1.86
SOCS4-201ENST00000339298 PTTG2Q9NZH5 202 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 MPP6Q9NZW5 540 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 PCSK1NQ9UHG2 260 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 MSRAQ9UJ68 235 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 EXOC7Q9UPT5 735 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 EXOGQ9Y2C4 368 aaKnown RBP3.4□□□□□ -1.86
SOCS4-201ENST00000339298 FHOD1Q9Y613 1164 aa3.4□□□□□ -1.86
SOCS4-201ENST00000339298 GTPBP10A4D1E9 387 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 H7C1Q1 480 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PRPF3O43395 683 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PLS3P13797 630 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ACPPP15309 386 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TMEM11P17152 192 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 JAK1P23458 1154 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 NR5A1Q13285 461 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PPP1R26Q5T8A7 1209 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 FAM102BQ5T8I3 360 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PCGF5Q86SE9 256 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 MAP4K3Q8IVH8 894 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 FAM133AQ8N9E0 248 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 THAP3Q8WTV1 239 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 XAGE5Q8WWM1 108 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ASB12Q8WXK4 309 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 RIN2Q8WYP3 895 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ZNF845Q96IR2 970 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 VRK1Q99986 396 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PYM1Q9BRP8 204 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 CCDC90BQ9GZT6 254 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SLC25A18Q9H1K4 315 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TNKS2Q9H2K2 1166 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 METTL8Q9H825 291 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 CUEDC1Q9NWM3 386 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ADAMTS8Q9UP79 889 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PCDHGB3Q9Y5G1 929 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 BICRAQ9NZM4 1560 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 CCDC162PA2VCL2 907 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 A6NL46 340 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TNNC2P02585 160 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 KRT19P08727 400 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ZNF806P0C7X5 589 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TCP1P17987 556 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 GNL1P36915 607 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 MTHFRP42898 656 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 MTMR1Q13613 665 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 LPCAT2Q7L5N7 544 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TBC1D1Q86TI0 1168 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TTC5Q8N0Z6 440 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 C7orf57Q8NEG2 295 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 BCAS4Q8TDM0 211 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 AFAP1L1Q8TED9 768 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 OSCP1Q8WVF1 389 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PHF21AQ96BD5 680 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SLF1Q9BQI6 1058 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 HAUS8Q9BT25 410 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 THUMPD3Q9BV44 507 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PUS3Q9BZE2 481 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 AQRO60306 1485 aaKnown RBP eCLIP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ARHGAP10A1A4S6 786 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 A6NCN8 305 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TNPO2O14787 897 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 DYNC1LI2O43237 492 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 HSPD1P10809 573 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 MTHFD1P11586 935 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 CDC25CP30307 473 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 COPB1P53618 953 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PPIL2Q13356 520 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 BLMHQ13867 455 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SUZ12Q15022 739 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 EDRF1Q3B7T1 1238 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ERFEQ4G0M1 354 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TAF1BQ53T94 588 aaPredicted RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TRAF7Q6Q0C0 670 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 NYAP1Q6ZVC0 841 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ENOSF1Q7L5Y1 443 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SDR16C5Q8N3Y7 309 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 ARL6IP6Q8N6S5 226 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 GOLGA5Q8TBA6 731 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 MAIP1Q8WWC4 291 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 NMD3Q96D46 503 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SUCLG2Q96I99 432 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 CATSPER2Q96P56 530 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 NAA15Q9BXJ9 866 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 OSBPL1AQ9BXW6 950 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 TDP1Q9NUW8 608 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 SRRDQ9UH36 339 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 DDX20Q9UHI6 824 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 METRNQ9UJH8 293 aa3.4□□□□□ -1.87
SOCS4-201ENST00000339298 DBNLQ9UJU6 430 aaKnown RBP3.4□□□□□ -1.87
SOCS4-201ENST00000339298 PRDM4Q9UKN5 801 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms