RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 POLR2BP30876 1174 aaKnown RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 RPL9P32969 192 aaKnown RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 MYL6P60660 151 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 FPGSQ05932 587 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 HS1BP3Q53T59 392 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 CRIPAKQ8N1N5 446 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 BAP1Q92560 729 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 C18orf25Q96B23 403 aaPredicted RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 STK33Q9BYT3 514 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 NIF3L1Q9GZT8 377 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 UBE2TQ9NPD8 197 aaPredicted RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 ZNHIT6Q9NWK9 470 aaKnown RBP15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 DNAJC12Q9UKB3 198 aa15.63■□□□□ 0.09
NIPAL3-202ENST00000339255 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 OFD1O75665 1012 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 CLSTN1O94985 981 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 LRPAP1P30533 357 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 SCNN1GP51170 649 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 APBA1Q02410 837 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 TUSC3Q13454 348 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 RAPGEF1Q13905 1077 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 TCTN1Q2MV58 587 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 ZNF667Q5HYK9 610 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 NOMO2Q5JPE7 1267 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 IQCEQ6IPM2 695 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 RRAGAQ7L523 313 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 DDX27Q96GQ7 796 aaKnown RBP15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 HPDLQ96IR7 371 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 UROC1Q96N76 676 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 PI4K2AQ9BTU6 479 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 MRPL9Q9BYD2 267 aaKnown RBP15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 CXCL16Q9H2A7 254 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 PLAGL2Q9UPG8 496 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 AGAP1Q9UPQ3 857 aa15.62■□□□□ 0.09
NIPAL3-202ENST00000339255 F8VZ95 297 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 CST3P01034 146 aaPredicted RBP15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 CCDC172P0C7W6 258 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 IBSPP21815 317 aaPredicted RBP15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 PAX3P23760 479 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 ADKP55263 362 aaKnown RBP15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 JAM2P57087 298 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 LRMPQ12912 555 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 NAB2Q15742 525 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 C9orf57Q5W0N0 161 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 PDXDC1Q6P996 788 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 LRRC8AQ8IWT6 810 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 INPP5FQ9Y2H2 1132 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 CEP290O15078 2479 aa15.61■□□□□ 0.09
NIPAL3-202ENST00000339255 CCDC85CA6NKD9 419 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 LRRC53A6NM62 1247 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 PIRO00625 290 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 LRRN2O75325 713 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 AMHP03971 560 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 STAT1P42224 750 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 YWHAEP62258 255 aaKnown RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 CUL2Q13617 745 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 SFMBT2Q5VUG0 894 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 PSRC1Q6PGN9 363 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 ARHGEF19Q8IW93 802 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 TTC39CQ8N584 583 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 SHC3Q92529 594 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 NUB1Q9Y5A7 615 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 RNF225M0QZC1 329 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 POMCP01189 267 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 FGFR1P11362 822 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 FECHP22830 423 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 GUCY2FP51841 1108 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 DRAP1Q14919 205 aaPredicted RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 MEA1Q16626 185 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 WDR72Q3MJ13 1102 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 SV2CQ496J9 727 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 GJB7Q6PEY0 223 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 BADQ92934 168 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 TATDN2Q93075 761 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 APOBEC3GQ9HC16 384 aaKnown RBP15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 RNF19AQ9NV58 838 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 AIPL1Q9NZN9 384 aa15.6■□□□□ 0.09
NIPAL3-202ENST00000339255 FERP16591 822 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 SOX5P35711 763 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 TAF6P49848 677 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 WDR5P61964 334 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 TNNC1P63316 161 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 CDK17Q00537 523 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 RNASELQ05823 741 aaKnown RBP15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 DSC1Q08554 894 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 SPOPLQ6IQ16 392 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 KREMEN1Q96MU8 473 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 LBHD1Q9BQE6 289 aaPredicted RBP15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 BCO2Q9BYV7 579 aa15.59■□□□□ 0.09
NIPAL3-202ENST00000339255 CYP3A43Q9HB55 503 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms