RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ZNRF3Q9ULT6 936 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 FIS1Q9Y3D6 152 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CSADQ9Y600 493 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 DUOX1Q9NRD9 1551 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CIITAP33076 1130 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ADCY2Q08462 1091 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 SPIRE1Q08AE8 756 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
HPS4-201ENST00000336873 LY6KQ17RY6 165 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 GPAT2Q6NUI2 795 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 KDM7AQ6ZMT4 941 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CCDC110Q8TBZ0 833 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 RUNDC3BQ96NL0 473 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CEP41Q9BYV8 373 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.72□□□□□ -1.01
HPS4-201ENST00000336873 GGA3Q9NZ52 723 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 TXNDC16Q9P2K2 825 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CHMP2BQ9UQN3 213 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 R3HDM2Q9Y2K5 976 aaKnown RBP8.72□□□□□ -1.01
HPS4-201ENST00000336873 PCDHA2Q9Y5H9 948 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 PLSCR1O15162 318 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 TNNC2P02585 160 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 PDGFRBP09619 1106 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 MRPS9P82933 396 aaKnown RBP8.72□□□□□ -1.01
HPS4-201ENST00000336873 KRT76Q01546 638 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 TTC27Q6P3X3 843 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ISLR2Q6UXK2 745 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 MOB2Q70IA6 237 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 DAW1Q8N136 415 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 TMEM237Q96Q45 408 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ABCF3Q9NUQ8 709 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 NEU2Q9Y3R4 380 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 NID2Q14112 1375 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 KNL1Q8NG31 2342 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 CST8O60676 142 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 ICAM1P05362 532 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.01
HPS4-201ENST00000336873 ATP5DP30049 168 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 SSTR1P30872 391 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 TNFSF9P41273 254 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 PSEN1P49768 467 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 STAT5BP51692 787 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 ATXN3P54252 364 aaPredicted RBP8.71□□□□□ -1.01
HPS4-201ENST00000336873 MYL6P60660 151 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 PGM5Q15124 567 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 STXBP2Q15833 593 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 FAM102AQ5T9C2 384 aaPredicted RBP8.71□□□□□ -1.01
HPS4-201ENST00000336873 ANO5Q75V66 913 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 BSNDQ8WZ55 320 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 MKL1Q969V6 931 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 ERP27Q96DN0 273 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 ECT2Q9H8V3 914 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 SLCO1B3Q9NPD5 702 aa8.71□□□□□ -1.01
HPS4-201ENST00000336873 IGLV3-22A0A075B6J6 115 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 UBOX5O94941 541 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 CSPG5O95196 566 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 CCNE2O96020 404 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 INHBAP08476 426 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 FECHP22830 423 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 MSH2P43246 934 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 EIF3BP55884 814 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 PTENP60484 403 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 IL9RQ01113 521 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 EMC2Q15006 297 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 PSMD6Q15008 389 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 MAPK6Q16659 721 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 OR5B17Q8NGF7 314 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 RNF34Q969K3 372 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 RSRC1Q96IZ7 334 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 AGAP3Q96P47 875 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 MOV10L1Q9BXT6 1211 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 WNT8AQ9H1J5 351 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 AGO4Q9HCK5 861 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 MRPL47Q9HD33 250 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 SIX2Q9NPC8 291 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 NRBP2Q9NSY0 501 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 FNDC3AQ9Y2H6 1198 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 UMODL1Q5DID0 1318 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 CICQ96RK0 1608 aaPredicted RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 ARHGAP42A6NI28 874 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 M0QYV0 167 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 EIF3DO15371 548 aaKnown RBP eCLIP8.71□□□□□ -1.02
HPS4-201ENST00000336873 APRTP07741 180 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 VIL1P09327 827 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 HSPA9P38646 679 aaKnown RBP8.71□□□□□ -1.02
HPS4-201ENST00000336873 DCAF12L1Q5VU92 463 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 FAM71DQ8N9W8 422 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 GRK7Q8WTQ7 553 aa8.71□□□□□ -1.02
HPS4-201ENST00000336873 SCFD2Q8WU76 684 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms