RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF677Q86XU0 584 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 OMA1Q96E52 524 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 SPDYE5A6NIY4 337 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 ATP1A1P05023 1023 aaKnown RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 CCND1P24385 295 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 NUP62P37198 522 aaPredicted RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 SNAP25P60880 206 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 CENPCQ03188 943 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 EDRF1Q3B7T1 1238 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 SPDYE7PQ495Y7 208 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 XKR3Q5GH77 459 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 BTN2A2Q8WVV5 523 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 BRD8Q9H0E9 1235 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 RIC8BQ9NVN3 520 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 ABT1Q9ULW3 272 aaKnown RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 AURKCQ9UQB9 309 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 SYNDIG1LA6NDD5 238 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 TLR2O60603 784 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 GPSM2P81274 684 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 CASP10Q92851 521 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 C6orf203Q9P0P8 240 aaPredicted RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 M0R3G1 203 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 RGS4P49798 205 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 GYS2P54840 703 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 TBL3Q12788 808 aaKnown RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 TRIM63Q969Q1 353 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 PRPF18Q99633 342 aaKnown RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 ARHGEF38Q9NXL2 777 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 VPS9D1Q9Y2B5 631 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 ESYT3A0FGR9 886 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 TCP11X1B4DZS4 312 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 DFFAO00273 331 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 IL18RAPO95256 599 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 SRGNP10124 158 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 CYP2D6P10635 497 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 CPB1P15086 417 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 ACCSLQ4AC99 568 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 SYTL3Q4VX76 610 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 AARS2Q5JTZ9 985 aaKnown RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 GEMIN8Q9NWZ8 242 aaKnown RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 ZC3H7BQ9UGR2 993 aaKnown RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 CDY2AQ9Y6F7 541 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 CDY1Q9Y6F8 540 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 KCNN4O15554 427 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 ALDH1A1P00352 501 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 PRKCBP05771 671 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 SULT1E1P49888 294 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 VCPP55072 806 aaKnown RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 ZNF200P98182 395 aaPredicted RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 TRIM16LQ309B1 348 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 SCN3BQ9NY72 215 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 ARIH2O95376 493 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 MRPS25P82663 173 aaKnown RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 LRRC14Q15048 493 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 GTF3C2Q8WUA4 911 aaPredicted RBP13.71□□□□□ -0.21
HLCS-201ENST00000336648 RBBP8Q99708 897 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 RHBDL2Q9NX52 303 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 SOX13Q9UN79 622 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 CDYLQ9Y232 598 aa13.71□□□□□ -0.21
HLCS-201ENST00000336648 A0A1W2PQJ5 194 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 ECE2O60344 883 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 DLGAP3O95886 979 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 CD4P01730 458 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 METP08581 1390 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 DCAF4L1Q3SXM0 396 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 WLSQ5T9L3 541 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.22
HLCS-201ENST00000336648 RNF135Q8IUD6 432 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.22
HLCS-201ENST00000336648 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.224e-6■■□□□ 13.2
HLCS-201ENST00000336648 PDK1Q15118 436 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 VPS37AQ8NEZ2 397 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 OTULINQ96BN8 352 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 AMACRQ9UHK6 382 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 MAGEB2O15479 319 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 ATP9BO43861 1147 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 MOCS2O96007 188 aaPredicted RBP13.7□□□□□ -0.22
HLCS-201ENST00000336648 MYL2P10916 166 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 RFC5P40937 340 aa13.7□□□□□ -0.22
HLCS-201ENST00000336648 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms