RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ARHGEF35A5YM69 484 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRIM49BA6NDI0 452 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 LRRIQ4A6NIV6 560 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 PP2D1A8MPX8 630 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 FSCN2O14926 492 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 GNA14O95837 355 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 PRLRP16471 622 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 CDC25AP30304 524 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 VAV2P52735 878 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 BCAR1P56945 870 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 SPA17Q15506 151 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 ECM1Q16610 540 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 AMHR2Q16671 573 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 NOMO2Q5JPE7 1267 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 BEND6Q5SZJ8 279 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 CCDC122Q5T0U0 273 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 WDR59Q6PJI9 974 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 AGMOQ6ZNB7 445 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 TMEM173Q86WV6 379 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 MICAL1Q8TDZ2 1067 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 PGBD4Q96DM1 585 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 EIF2AQ9BY44 585 aaKnown RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 NFKBIZQ9BYH8 718 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 NT5C3AQ9H0P0 336 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 RSAD1Q9HA92 442 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 MED4Q9NPJ6 270 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 SPG21Q9NZD8 308 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 BARX2Q9UMQ3 279 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRIOO75962 3097 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 PES1O00541 588 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 PER2O15055 1255 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 B4GALT5O43286 388 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 B4GALT3O60512 393 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 LCA5LO95447 670 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 ARF4P18085 180 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 OAS2P29728 719 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 RNASELQ05823 741 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 POU5F1BQ06416 359 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 ADAM15Q13444 863 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 TMEM119Q4V9L6 283 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 VWA3BQ502W6 1294 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 HYIQ5T013 277 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 IER5LQ5T953 404 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 ANKRD40Q6AI12 368 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 PADI6Q6TGC4 694 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 FAM178BQ8IXR5 827 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 KCTD17Q8N5Z5 321 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 SMG8Q8ND04 991 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 URGCPQ8TCY9 931 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 RAD54LQ92698 747 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 CHP1Q99653 195 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 MMTAG2Q9BU76 263 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 TLE6Q9H808 572 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 DNAJB4Q9UDY4 337 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 CD207Q9UJ71 328 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 IPPQ9Y573 584 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 CNTNAP2Q9UHC6 1331 aa11.98□□□□□ -0.49
APOBEC3B-201ENST00000333467 HIDE1A8MVS5 230 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MBTPS2O43462 519 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MUTP22033 750 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 AXLP30530 894 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MLH1P40692 756 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 ALDH7A1P49419 539 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 AFF1P51825 1210 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 KRT17Q04695 432 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 STK4Q13043 487 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 SMAD4Q13485 552 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 DUSP6Q16828 381 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MIIPQ5JXC2 388 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 CDCA2Q69YH5 1023 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 PDE12Q6L8Q7 609 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MRPL10Q7Z7H8 261 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 CDR2LQ86X02 465 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 VN1R2Q8NFZ6 395 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 SYN2Q92777 582 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 TMEM169Q96HH4 297 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 MSLNLQ96KJ4 702 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 CEP63Q96MT8 703 aa11.97□□□□□ -0.49
APOBEC3B-201ENST00000333467 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms