RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 NSRP1Q9H0G5 558 aaKnown RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 NAALADL1Q9UQQ1 740 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 MAPK13O15264 365 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 ETS1P14921 441 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 ACOT2P49753 483 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 MGAT5Q09328 741 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 KAZNQ674X7 775 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
VPS33B-201ENST00000333371 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
VPS33B-201ENST00000333371 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 MFSD14AQ96MC6 490 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
VPS33B-201ENST00000333371 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 PAIP2Q9BPZ3 127 aaKnown RBP13.1□□□□□ -0.31
VPS33B-201ENST00000333371 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPS33B-201ENST00000333371 SPAG7O75391 227 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 KRT10P13645 584 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 MTMR2Q13614 643 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 NEDD9Q14511 834 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 GIMAP7Q8NHV1 300 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 SLCO2A1Q92959 643 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 GABBR1Q9UBS5 961 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 STK38LQ9Y2H1 464 aa13.1□□□□□ -0.31
VPS33B-201ENST00000333371 PMM2O15305 246 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 LYPLA2O95372 231 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FDX1P10109 184 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FOXN2P32314 431 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 IZUMO3Q5VZ72 239 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 CROCCP2Q86T23 111 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 GINM1Q9NU53 330 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 EXOC7Q9UPT5 735 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 WDR64B1ANS9 1081 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 PIAS1O75925 651 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 GAS8O95995 478 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 KRT16P08779 473 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 STX2P32856 288 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 PSMC4P43686 418 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 TMED2Q15363 201 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 SEZ6Q53EL9 994 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 SPATA21Q7Z572 469 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ZBTB45Q96K62 511 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FHDC1Q9C0D6 1143 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ZBED4O75132 1171 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 GSTA1P08263 222 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 TNNI1P19237 187 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 FAM182AQ5T1J6 154 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ZFYVE27Q5T4F4 411 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 NBPF12Q5TAG4 269 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-201ENST00000333371 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 GPD1LQ8N335 351 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 AGAP11Q8TF27 550 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 IWS1Q96ST2 819 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
VPS33B-201ENST00000333371 KAT6AQ92794 2004 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 HLA-DRAP01903 254 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 NQO1P15559 274 aaKnown RBP13.08□□□□□ -0.32
VPS33B-201ENST00000333371 ELF1P32519 619 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 MTM1Q13496 603 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 P3H1Q32P28 736 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 TDRD10Q5VZ19 366 aaKnown RBP13.08□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF365Q70YC5 407 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 OSBPL8Q9BZF1 889 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms