RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CASKIN2Q8WXE0 1202 aa9.63□□□□□ -0.87
COPB2-201ENST00000333188 PARK7Q99497 189 aaKnown RBP9.63□□□□□ -0.87
COPB2-201ENST00000333188 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.63□□□□□ -0.873e-7■■□□□ 12.6
COPB2-201ENST00000333188 AP5M1Q9H0R1 490 aa9.63□□□□□ -0.87
COPB2-201ENST00000333188 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
COPB2-201ENST00000333188 ERVK-5Q9HDB9 667 aa9.63□□□□□ -0.87
COPB2-201ENST00000333188 NFASCO94856 1347 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 UBE4BO95155 1302 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 OGTO15294 1046 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 PIAS1O75925 651 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 TMEM253P0C7T8 217 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 GARTP22102 1010 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ADORA2BP29275 332 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CTNNA1P35221 906 aaKnown RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 ARL2P36404 184 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 HTRA3P83110 453 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CDR2Q01850 454 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CRELD2Q6UXH1 353 aaPredicted RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 SLC9A9Q8IVB4 645 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 HSPH1Q92598 858 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 PWWP2AQ96N64 755 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CALN1Q9BXU9 219 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 SMYD3Q9H7B4 428 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 TSKSQ9UJT2 592 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 COL2A1P02458 1487 aaPredicted RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 A0A0B4J269 797 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 M0QYV0 167 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 SOCS7O14512 581 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 VNN1O95497 513 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 LDHAP00338 332 aaKnown RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ARF4P18085 180 aaPredicted RBP9.62□□□□□ -0.87
COPB2-201ENST00000333188 RFC5P40937 340 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ZACNQ401N2 412 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 SGO2Q562F6 1265 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 OR6B2Q6IFH4 312 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 DNAJC24Q6P3W2 148 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ERICH1Q86X53 443 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 FAM71AQ8IYT1 594 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CCDC26Q8TAB7 109 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ZNF606Q8WXB4 792 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CDT1Q9H211 546 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 C17orf75Q9HAS0 396 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 ADAM21Q9UKJ8 722 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 CEP290O15078 2479 aa9.62□□□□□ -0.87
COPB2-201ENST00000333188 IGF2BP3O00425 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPB2-201ENST00000333188 PJA2O43164 708 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ATP2C2O75185 946 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 PRKCIP41743 596 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 EFNA5P52803 228 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 DR1Q01658 176 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 EFCAB13Q8IY85 973 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 SHC3Q92529 594 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ACO2Q99798 780 aaKnown RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 TIPINQ9BVW5 301 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ARHGAP39Q9C0H5 1083 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 PCDHGC5Q9Y5F6 944 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MCM3APO60318 1980 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ZRANB2O95218 330 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPB2-201ENST00000333188 ACSL3O95573 720 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 SNAI1O95863 264 aaPredicted RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 TCF4P15884 667 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MCM3P25205 808 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 FLT3P36888 993 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 PAK2Q13177 524 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 DGKDQ16760 1214 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ACOT1Q86TX2 421 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 TLK2Q86UE8 772 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 C18orf25Q96B23 403 aaPredicted RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 FAM149B1Q96BN6 582 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 FGD4Q96M96 766 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 MAGED2Q9UNF1 606 aaPredicted RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MYO7AQ13402 2215 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 F8VP50 259 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 TREHO43280 583 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MSCO60682 206 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 CLTAP09496 248 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ELNP15502 786 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ADCY8P40145 1251 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 PSMC1P62191 440 aaKnown RBP9.61□□□□□ -0.87
COPB2-201ENST00000333188 C10orf76Q5T2E6 689 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MPZL3Q6UWV2 235 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 RHOT2Q8IXI1 618 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MAML3Q96JK9 1138 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 RPGRIP1Q96KN7 1286 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 MFSD14AQ96MC6 490 aa9.61□□□□□ -0.87
COPB2-201ENST00000333188 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms