RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SYDE1Q6ZW31 735 aaPredicted RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 RSPH3Q86UC2 560 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 RPS6KC1Q96S38 1066 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 RMDN3Q96TC7 470 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 MIS12Q9H081 205 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 SLC38A10Q9HBR0 1119 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 TRPC5Q9UL62 973 aaPredicted RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 RRM1P23921 792 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 ALDH1B1P30837 517 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 ARL4AP40617 200 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 SLC1A1P43005 524 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 MARCKSL1P49006 195 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 STX1BP61266 288 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 CNGA2Q16280 664 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 PDCD2Q16342 344 aaPredicted RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 FSCBQ5H9T9 825 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 PARD3BQ8TEW8 1205 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 DHX38Q92620 1227 aaKnown RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 NLRP4Q96MN2 994 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 PARVAQ9NVD7 372 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 MCM8Q9UJA3 840 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 CALB1P05937 261 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 WEE2P0C1S8 567 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 ZNF200P98182 395 aaPredicted RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 DDR1Q08345 913 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 MROH9Q5TGP6 573 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 C16orf87Q6PH81 154 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 ARHGAP27Q6ZUM4 889 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 SLC47A2Q86VL8 602 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 SLC35C1Q96A29 364 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 SLCO1B3Q9NPD5 702 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 GABBR1Q9UBS5 961 aa14.79□□□□□ -0.04
EPHB3-201ENST00000330394 MTO1Q9Y2Z2 717 aaKnown RBP14.79□□□□□ -0.04
EPHB3-201ENST00000330394 CCDC78A2IDD5 438 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 FOXO6A8MYZ6 492 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 TRIM49D1C9J1S8 452 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 DGKIO75912 1065 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RBP3P10745 1247 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CALB2P22676 271 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CASP5P51878 434 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 AUHQ13825 339 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CHI3L2Q15782 390 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 C16orf86Q6ZW13 317 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RYBPQ8N488 228 aaPredicted RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 STK32AQ8WU08 396 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 EXT2Q93063 718 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 ZC3H7BQ9UGR2 993 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 DAGLAQ9Y4D2 1042 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 KDM6AO15550 1401 aaPredicted RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 MEGF6O75095 1541 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 NTSR2O95665 410 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CRKP46108 304 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 EPHA7Q15375 998 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 SLC27A3Q5K4L6 730 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RARS2Q5T160 578 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 PLA2G4FQ68DD2 849 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RSBN1LQ6PCB5 846 aaPredicted RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 UPF3AQ9H1J1 476 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 ESYT2A0FGR8 921 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RAD17O75943 681 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 NDUFB10O96000 172 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 PTPN4P29074 926 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 SOX11P35716 441 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 GPSM2P81274 684 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 ROR1Q01973 937 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 CBWD2Q8IUF1 395 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 SULF1Q8IWU6 871 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 PIK3R5Q8WYR1 880 aa14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RAVER2Q9HCJ3 691 aaKnown RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 RBAKQ9NYW8 714 aaPredicted RBP14.78□□□□□ -0.04
EPHB3-201ENST00000330394 C1orf167Q5SNV9 1468 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 KRT7P08729 469 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 MCF2P10911 925 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 DNAL1Q4LDG9 190 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 SWSAP1Q6NVH7 229 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 DDX50Q9BQ39 737 aaKnown RBP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 SENP7Q9BQF6 1050 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 RNPEPL1Q9HAU8 725 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 NRBP2Q9NSY0 501 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 C2CD2Q9Y426 696 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 ZNF667Q5HYK9 610 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 B4GALNT2Q8NHY0 566 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 CYP2W1Q8TAV3 490 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 E2F7Q96AV8 911 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 CHST7Q9NS84 486 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 GTSE1Q9NYZ3 720 aa14.77□□□□□ -0.04
EPHB3-201ENST00000330394 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.04
EPHB3-201ENST00000330394 GRIN2DO15399 1336 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms