RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IMPDH2P12268 514 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 AMPD1P23109 780 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ADSSP30520 456 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 THOC5Q13769 683 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ZCCHC9Q8N567 271 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 CRYGNQ8WXF5 182 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 KAT5Q92993 513 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 MCUR1Q96AQ8 359 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 TUBB6Q9BUF5 446 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 UVRAGQ9P2Y5 699 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 HEY2Q9UBP5 337 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 SLC16A2P36021 539 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 CDK7P50613 346 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 OVGP1Q12889 678 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 RBM12BQ8IXT5 1001 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 SCYL3Q8IZE3 742 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 SKA1Q96BD8 255 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 TTC25Q96NG3 672 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
CCDC60-201ENST00000327554 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 A8MXQ7 604 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 ZBTB5O15062 677 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
CCDC60-201ENST00000327554 DNAJC6O75061 913 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 BTDP43251 543 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 DLG4P78352 724 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 FMO1Q01740 532 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 PRR16Q569H4 304 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 MOXD1Q6UVY6 613 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 ANKS1BQ7Z6G8 1248 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 LENG9Q96B70 501 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 P2RX7Q99572 595 aaKnown RBP13.53□□□□□ -0.24
CCDC60-201ENST00000327554 PREBQ9HCU5 417 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 SAYSD1Q9NPB0 183 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 FAM13AO94988 1023 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 RARBP10826 455 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 ADRA1DP25100 572 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 CETN2P41208 172 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 CENPCQ03188 943 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 LCA5Q86VQ0 697 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
CCDC60-201ENST00000327554 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 VTI1AQ96AJ9 217 aa13.53□□□□□ -0.24
CCDC60-201ENST00000327554 FBXO6Q9NRD1 293 aaPredicted RBP13.53□□□□□ -0.24
CCDC60-201ENST00000327554 DNAAF2Q9NVR5 837 aaKnown RBP13.53□□□□□ -0.24
CCDC60-201ENST00000327554 EMSYQ7Z589 1322 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 A0A0G2JND7 137 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 F5H6K3 240 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 EML1O00423 815 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 PLS3P13797 630 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 ETS2P15036 469 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 KLRC2P26717 231 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 SERPINB3P29508 390 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 PIK3CAP42336 1068 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 RAP1GDS1P52306 607 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 KLF1Q13351 362 aaPredicted RBP13.52□□□□□ -0.24
CCDC60-201ENST00000327554 KRT72Q14CN4 511 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 FASTKD3Q14CZ7 662 aaKnown RBP13.52□□□□□ -0.24
CCDC60-201ENST00000327554 CCDC142Q17RM4 750 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 EPC2Q52LR7 807 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 ZNF365Q70YC5 407 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 FAM118BQ9BPY3 351 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 ECSITQ9BQ95 431 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 CENPKQ9BS16 269 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 FOXP3Q9BZS1 431 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 KCNK13Q9HB14 408 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 ARHGEF4Q9NR80 690 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 ANGPTL2Q9UKU9 493 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 SUGT1Q9Y2Z0 365 aa13.52□□□□□ -0.24
CCDC60-201ENST00000327554 UBE4BO95155 1302 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 TBX3O15119 743 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 COQ9O75208 318 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 LDHCP07864 332 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms