RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 CALUO43852 315 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-201ENST00000320936 TMEM191BP0C7N4 346 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 EPCAMP16422 314 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 PTCRAQ6ISU1 281 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-201ENST00000320936 CD300LGQ6UXG3 332 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 NT5DC4Q86YG4 428 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 CACTINQ8WUQ7 758 aaKnown RBP20.25■□□□□ 0.83
CIRBP-201ENST00000320936 GSDMAQ96QA5 445 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 APOL5Q9BWW9 433 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 PCDHA5Q9Y5H7 936 aa20.25■□□□□ 0.83
CIRBP-201ENST00000320936 PDXKO00764 312 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 LILRB3O75022 631 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 GLUD1P00367 558 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 NR3C1P04150 777 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 DLATP10515 647 aaKnown RBP20.24■□□□□ 0.83
CIRBP-201ENST00000320936 FGFR3P22607 806 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 WNT7BP56706 349 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 SURF1Q15526 300 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 C9orf57Q5W0N0 161 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-201ENST00000320936 DSTYKQ6XUX3 929 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 PALB2Q86YC2 1186 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 C12orf56Q8IXR9 622 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 FNBP1Q96RU3 617 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 KCTD10Q9H3F6 313 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 FAM50BQ9Y247 325 aa20.24■□□□□ 0.83
CIRBP-201ENST00000320936 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
CIRBP-201ENST00000320936 PPEF2O14830 753 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 TNNC2P02585 160 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 ZNF658Q5TYW1 1059 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-201ENST00000320936 ANKRD54Q6NXT1 300 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 ELMSAN1Q6PJG2 1045 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 GUF1Q8N442 669 aaKnown RBP20.23■□□□□ 0.83
CIRBP-201ENST00000320936 ANKRD36BP1Q96IX9 119 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 FAM84AQ96KN4 292 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 MTMR12Q9C0I1 747 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 DZANK1Q9NVP4 752 aa20.23■□□□□ 0.83
CIRBP-201ENST00000320936 SCN1AP35498 2009 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 SYN3O14994 580 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 ITGB3P05106 788 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 KRT19P08727 400 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 CLCN4P51793 760 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 CYP24A1Q07973 514 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 SMAD4Q13485 552 aaKnown RBP20.22■□□□□ 0.83
CIRBP-201ENST00000320936 PUS10Q3MIT2 529 aaKnown RBP20.22■□□□□ 0.83
CIRBP-201ENST00000320936 VARS2Q5ST30 1063 aaKnown RBP20.22■□□□□ 0.83
CIRBP-201ENST00000320936 CEP135Q66GS9 1140 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 ISM2Q6H9L7 571 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 ANKS3Q6ZW76 656 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 GPR65Q8IYL9 337 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
CIRBP-201ENST00000320936 SLC22A17Q8WUG5 538 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 FBXL18Q96ME1 805 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 FNIP2Q9P278 1114 aa20.22■□□□□ 0.83
CIRBP-201ENST00000320936 TSC2P49815 1807 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 SPATA31D3P0C874 917 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 TNNI1P19237 187 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 POLR2BP30876 1174 aaKnown RBP20.21■□□□□ 0.83
CIRBP-201ENST00000320936 STIM1Q13586 685 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 KCNC3Q14003 757 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 CAMK4Q16566 473 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 TMEM184AQ6ZMB5 413 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 SPATA31D4Q6ZUB0 917 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 USP37Q86T82 979 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 ELOA2Q8IYF1 753 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-201ENST00000320936 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-201ENST00000320936 MSLNLQ96KJ4 702 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 GTPBP4Q9BZE4 634 aaKnown RBP20.21■□□□□ 0.83
CIRBP-201ENST00000320936 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 PCDHB8Q9UN66 801 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 FRMD4BQ9Y2L6 1034 aa20.21■□□□□ 0.83
CIRBP-201ENST00000320936 ANO9A1A5B4 782 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 H7C4K7 107 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 BIN1O00499 593 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 CLSTN1O94985 981 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 ODC1P11926 461 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 HOXB8P17481 243 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-201ENST00000320936 NR2F2P24468 414 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 TAF6P49848 677 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 LILRA4P59901 499 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 PSMD6Q15008 389 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 DUOXA2Q1HG44 320 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 SV2CQ496J9 727 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 RARS2Q5T160 578 aaKnown RBP20.2■□□□□ 0.82
CIRBP-201ENST00000320936 ZNF280DQ6N043 979 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 CLEC17AQ6ZS10 378 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 WDR49Q8IV35 697 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 CSGALNACT2Q8N6G5 542 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 SMRP1Q8NCR6 262 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 ADAMTS19Q8TE59 1207 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 TSG101Q99816 390 aa20.2■□□□□ 0.82
CIRBP-201ENST00000320936 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms