RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
CRAT-201ENST00000318080 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
CRAT-201ENST00000318080 DENND2DQ9H6A0 471 aaPredicted RBP17.04■□□□□ 0.32
CRAT-201ENST00000318080 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
CRAT-201ENST00000318080 SP100P23497 879 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 TRAF1Q13077 416 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 USP4Q13107 963 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 TRMT10CQ7L0Y3 403 aaKnown RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 C9orf72Q96LT7 481 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 ROPN1BQ9BZX4 212 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 LRRC19Q9H756 370 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 ROPN1Q9HAT0 212 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 WNT10BO00744 389 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 AHCYL1O43865 530 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 TTC4O95801 387 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 TAC1P20366 129 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 APBB1IPQ7Z5R6 666 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 DTX3LQ8TDB6 740 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 RUNDC3BQ96NL0 473 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 SERPINB12Q96P63 405 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 TMEM39BQ9GZU3 492 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 NINJ2Q9NZG7 142 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 NAALADL1Q9UQQ1 740 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 LRRC42Q9Y546 428 aa17.03■□□□□ 0.32
CRAT-201ENST00000318080 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
CRAT-201ENST00000318080 FZD9O00144 591 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 LUC7L3O95232 432 aaKnown RBP17.02■□□□□ 0.32
CRAT-201ENST00000318080 GGPS1O95749 300 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 GH2P01242 217 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 ADRB2P07550 413 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 T-ENOLP0DO92 83 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 GBP1P32455 592 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 ECE1P42892 770 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 PPP2R5CQ13362 524 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 RASA3Q14644 834 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 CLUL1Q15846 466 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 FAM71AQ8IYT1 594 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 SLC5A5Q92911 643 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 TOPORSQ9NS56 1045 aaPredicted RBP17.02■□□□□ 0.32
CRAT-201ENST00000318080 CYP39A1Q9NYL5 469 aa17.02■□□□□ 0.32
CRAT-201ENST00000318080 THAP12O43422 761 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 BMP3P12645 472 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 CCNB1P14635 433 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.31
CRAT-201ENST00000318080 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.31
CRAT-201ENST00000318080 CCNJLQ8IV13 435 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 NACC1Q96RE7 527 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 MRIQ9BWK5 157 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.02■□□□□ 0.31
CRAT-201ENST00000318080 MYH11P35749 1972 aa17.02■□□□□ 0.31
CRAT-201ENST00000318080 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 CYP1A2P05177 515 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 TCEAL1Q15170 157 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 MUM1Q2TAK8 710 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 SLC9A9Q8IVB4 645 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 OCEL1Q9H607 264 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 HSPBP1Q9NZL4 362 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 SIPA1L1O43166 1804 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 FSCN2O14926 492 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 MTA2O94776 668 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 ATP6V1C1P21283 382 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 TMED2Q15363 201 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 TRIM74Q86UV6 250 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 TRIM73Q86UV7 250 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 CBWD2Q8IUF1 395 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 C12orf50Q8NA57 414 aaPredicted RBP17.01■□□□□ 0.31
CRAT-201ENST00000318080 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 DNAJC9Q8WXX5 260 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 SLC7A6OSQ96CW6 309 aaPredicted RBP17.01■□□□□ 0.31
CRAT-201ENST00000318080 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 C12orf65Q9H3J6 166 aaKnown RBP17.01■□□□□ 0.31
CRAT-201ENST00000318080 GPRC5CQ9NQ84 441 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 PCMTD2Q9NV79 361 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 SEL1LQ9UBV2 794 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 GRID1Q9ULK0 1009 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
CRAT-201ENST00000318080 CYP11B1P15538 503 aa17■□□□□ 0.31
CRAT-201ENST00000318080 YY1P25490 414 aa17■□□□□ 0.31
CRAT-201ENST00000318080 RANBP1P43487 201 aa17■□□□□ 0.31
CRAT-201ENST00000318080 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
CRAT-201ENST00000318080 CYP4F22Q6NT55 531 aa17■□□□□ 0.31
CRAT-201ENST00000318080 CROCCP2Q86T23 111 aa17■□□□□ 0.31
CRAT-201ENST00000318080 LMNTD2Q8IXW0 634 aa17■□□□□ 0.31
CRAT-201ENST00000318080 GBP7Q8N8V2 638 aaPredicted RBP17■□□□□ 0.31
CRAT-201ENST00000318080 NMRK1Q9NWW6 199 aa17■□□□□ 0.31
CRAT-201ENST00000318080 WHRNQ9P202 907 aa17■□□□□ 0.31
CRAT-201ENST00000318080 STK24Q9Y6E0 443 aa17■□□□□ 0.31
CRAT-201ENST00000318080 LIN7AO14910 233 aaPredicted RBP17■□□□□ 0.31
CRAT-201ENST00000318080 GRIN3BO60391 1043 aa17■□□□□ 0.31
CRAT-201ENST00000318080 RRM1P23921 792 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms