RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 CCDC102AQ96A19 550 aa17.08■□□□□ 0.33
DEPDC7-202ENST00000311388 ANKRD36BP1Q96IX9 119 aa17.08■□□□□ 0.33
DEPDC7-202ENST00000311388 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.33
DEPDC7-202ENST00000311388 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.33
DEPDC7-202ENST00000311388 ALG6Q9Y672 507 aa17.08■□□□□ 0.33
DEPDC7-202ENST00000311388 CEP104O60308 925 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 ZMYND10O75800 440 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 GNA15P30679 374 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 PSEN2P49810 448 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 TRPC3Q13507 836 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 JADE1Q6IE81 842 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 TRPV1Q8NER1 839 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 CYFIP2Q96F07 1278 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 CALR3Q96L12 384 aaKnown RBP17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 NUP85Q9BW27 656 aa17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
DEPDC7-202ENST00000311388 ERLIN2O94905 339 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 SSTR3P32745 418 aaPredicted RBP17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 ASPAP45381 313 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 MCOLN2Q8IZK6 566 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 FUT8Q9BYC5 575 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 CISHQ9NSE2 258 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 Q9Y3F1 56 aa17.07■□□□□ 0.32
DEPDC7-202ENST00000311388 SMIM35A0A1B0GVV1 85 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 MYL3P08590 195 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CYP2C9P11712 490 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CPT1AP50416 773 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CENPCQ03188 943 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 NAA35Q5VZE5 725 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CPNE8Q86YQ8 564 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ZNF564Q8TBZ8 553 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 SELENOOQ9BVL4 669 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ARHGAP39Q9C0H5 1083 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CNOT8Q9UFF9 292 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 POLIQ9UNA4 740 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 TMEM110-MUSTN1A8MSY1 372 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CA12O43570 354 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 CD58P19256 250 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ZNF200P98182 395 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 MESDQ14696 234 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 PASD1Q8IV76 773 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ALG3Q92685 438 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 ZSWIM1Q9BR11 485 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 UVRAGQ9P2Y5 699 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 GINS2Q9Y248 185 aa17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-202ENST00000311388 THAP12O43422 761 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 ATP8B1O43520 1251 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 ERLIN1O75477 346 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 MYBL2P10244 700 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 NOMO3P69849 1222 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 SLC7A5Q01650 507 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 MON1BQ7L1V2 547 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 ZNF606Q8WXB4 792 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 GCOM2Q9BZD3 368 aaPredicted RBP17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 ASB7Q9H672 318 aa17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 NOC2LQ9Y3T9 749 aaKnown RBP17.05■□□□□ 0.32
DEPDC7-202ENST00000311388 PGRMC1O00264 195 aaKnown RBP17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 TREHO43280 583 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 KRT19P08727 400 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 COMTP21964 271 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 RRM1P23921 792 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 KYAT1Q16773 422 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 LLGL2Q6P1M3 1020 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 CCNI2Q6ZMN8 369 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 TRIM72Q6ZMU5 477 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 DNAJB3Q8WWF6 145 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 KRT35Q92764 455 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 OSMRQ99650 979 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 MROH7Q68CQ1 1323 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 MYADML2A6NDP7 307 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 ITGB3P05106 788 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 GRM5P41594 1212 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 FSCN1Q16658 493 aaKnown RBP17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 C8orf74Q6P047 294 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 PHLDB2Q86SQ0 1253 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 CD101Q93033 1021 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 KRT12Q99456 494 aa17.04■□□□□ 0.32
DEPDC7-202ENST00000311388 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms