RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CYP2C9P11712 490 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 GZMAP12544 262 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 PSEN2P49810 448 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 CPT1AP50416 773 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 SURF1Q15526 300 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 C8orf74Q6P047 294 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 ZSWIM8A7E2V4 1837 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 TMEM88BA6NKF7 163 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 KIF3CO14782 793 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 B4GALT4O60513 344 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 IGHA2P01877 340 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 CFHP08603 1231 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 KRT19P08727 400 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 MCF2P10911 925 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 CD58P19256 250 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 TNNT3P45378 269 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 GPC5P78333 572 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 TERF2Q15554 542 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 OSMRQ99650 979 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 ADAMTS10Q9H324 1103 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 PCDHB2Q9Y5E7 798 aa24.04■■□□□ 1.44
PDLIM2-202ENST00000308354 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 TREHO43280 583 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 IRF5Q13568 498 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 SCARA5Q6ZMJ2 495 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 DNAJB3Q8WWF6 145 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 STIM2Q9P246 746 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 MGAMO43451 1857 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 GPR32O75388 356 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 TNNC2P02585 160 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 TBXAS1P24557 533 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 FSCN1Q16658 493 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 JADE1Q6IE81 842 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 NT5DC3Q86UY8 548 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 ZNF410Q86VK4 478 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 RBBP8NLQ8NC74 664 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 ANKRD36BP1Q96IX9 119 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 STXBP5LQ9Y2K9 1186 aa24.03■■□□□ 1.44
PDLIM2-202ENST00000308354 BRCA2P51587 3418 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 PASD1Q8IV76 773 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 SYCE1Q8N0S2 351 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 USP38Q8NB14 1042 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 CPA5Q8WXQ8 436 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 TRIB2Q92519 343 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 A0A1B0GUA9 196 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 CES2O00748 559 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 AOC2O75106 756 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 WEE2P0C1S8 567 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 C6orf222P0C671 652 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 SGSM1Q2NKQ1 1148 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 SLC10A6Q3KNW5 377 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 ZNF394Q53GI3 561 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 C2CD6Q53TS8 623 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 SMC1BQ8NDV3 1235 aa24.02■■□□□ 1.44
PDLIM2-202ENST00000308354 MBLAC1A4D2B0 266 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 IL18RAPO95256 599 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 AKR1A1P14550 325 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 GNA15P30679 374 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 CAP1Q01518 475 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 CLEC16AQ2KHT3 1053 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 ZNF699Q32M78 642 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 PHLDB2Q86SQ0 1253 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 ZNF653Q96CK0 615 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 PBKQ96KB5 322 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 SELENOOQ9BVL4 669 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 XYLT2Q9H1B5 865 aa24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 NXF1Q9UBU9 619 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-202ENST00000308354 TMEM110-MUSTN1A8MSY1 372 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 HAS3O00219 553 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 CEP104O60308 925 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 FLT3LGP49771 235 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 FCGRTP55899 365 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 TRIM32Q13049 653 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 ACAD10Q6JQN1 1059 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 RHOT2Q8IXI1 618 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 C1orf127Q8N9H9 656 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 RUBCNQ92622 972 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 CYFIP2Q96F07 1278 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 GCOM2Q9BZD3 368 aaPredicted RBP24■■□□□ 1.43
PDLIM2-202ENST00000308354 SIX4Q9UIU6 781 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 ANK1P16157 1881 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 GUCY2FP51841 1108 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 LACTBP83111 547 aaPredicted RBP24■■□□□ 1.43
PDLIM2-202ENST00000308354 CATSPER4Q7RTX7 472 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 AENQ8WTP8 325 aaKnown RBP24■■□□□ 1.43
PDLIM2-202ENST00000308354 BTBD6Q96KE9 485 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 KRT12Q99456 494 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 NIF3L1Q9GZT8 377 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 CXCL16Q9H2A7 254 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 AMFRQ9UKV5 643 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 POLIQ9UNA4 740 aa24■■□□□ 1.43
PDLIM2-202ENST00000308354 SMIM35A0A1B0GVV1 85 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 UNGP13051 313 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 HOXA11P31270 313 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 BPIFB4P59827 614 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 ADAM17P78536 824 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 PURAQ00577 322 aaKnown RBP23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 DMTNQ08495 405 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 GLE1Q53GS7 698 aaKnown RBP23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 NAA35Q5VZE5 725 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms