RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ZDHHC24Q6UX98 284 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 ZNF720Q7Z2F6 126 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 LDHDQ86WU2 507 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CEP170P1Q96L14 293 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.47■□□□□ 0.07
PTPN9-201ENST00000306726 AGTP01019 485 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 ZCCHC18P0CG32 403 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PRAMEF18Q5VWM3 479 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PALM2Q8IXS6 379 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CFAP61Q8NHU2 1237 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 STMN2Q93045 179 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CCDC124Q96CT7 223 aaKnown RBP15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CALN1Q9BXU9 219 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PARP2Q9UGN5 583 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 ZMYND8Q9ULU4 1186 aaPredicted RBP15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PODXLO00592 558 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CYP3A4P08684 503 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 UBTFL6P0CB48 400 aaPredicted RBP15.47■□□□□ 0.07
PTPN9-201ENST00000306726 ARSEP51690 589 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 NCALDP61601 193 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 SCYL2Q6P3W7 929 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CD302Q8IX05 232 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 KIFAP3Q92845 792 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PPP1R36Q96LQ0 422 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 PCDHA2Q9Y5H9 948 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 KDSRQ06136 332 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 PKN2Q16513 984 aaKnown RBP15.46■□□□□ 0.07
PTPN9-201ENST00000306726 PDCD7Q8N8D1 485 aaKnown RBP15.46■□□□□ 0.07
PTPN9-201ENST00000306726 SMYD3Q9H7B4 428 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 DONSONQ9NYP3 566 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 ADAM22Q9P0K1 906 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 ESYT2A0FGR8 921 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 ARHGAP42A6NI28 874 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 MFAP3P55082 362 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 C6orf89Q6UWU4 347 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 ARHGEF18Q6ZSZ5 1173 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 TRABDQ9H4I3 376 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 C1orf112Q9NSG2 853 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 DLGAP2Q9P1A6 1054 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 ARL2BPQ9Y2Y0 163 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 POTEJP0CG39 1038 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 GBP1P32455 592 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 TMEM121Q9BTD3 319 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 MYLK2Q9H1R3 596 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 KMT5AQ9NQR1 393 aa15.46■□□□□ 0.07
PTPN9-201ENST00000306726 CEP55Q53EZ4 464 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 CYP4A22Q5TCH4 519 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 MTDHQ86UE4 582 aaKnown RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 CCDC89Q8N998 374 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 RUNDC3BQ96NL0 473 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 PIH1D1Q9NWS0 290 aaKnown RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 TRAF3IP3Q9Y228 551 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 FAM187AA6NFU0 413 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 PPFIA2O75334 1257 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SSTR1P30872 391 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 DHX34Q14147 1143 aaKnown RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 GRHL1Q9NZI5 618 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SEPT9Q9UHD8 586 aaPredicted RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 A0A1W2PPM1 405 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 ASNSP08243 561 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 JAG1P78504 1218 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SNRNP35Q16560 246 aaKnown RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 ANKRD20A2Q5SQ80 823 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 ANKRD20A1Q5TYW2 823 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SH3BP5LQ7L8J4 393 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
PTPN9-201ENST00000306726 SEMA4DQ92854 862 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 CFAP36Q96G28 342 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 C15orf41Q9Y2V0 281 aa15.45■□□□□ 0.06
PTPN9-201ENST00000306726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.44■□□□□ 0.06
PTPN9-201ENST00000306726 FKBP1BP68106 108 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTPN9-201ENST00000306726 EFCAB3Q8N7B9 438 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 GLIS1Q8NBF1 620 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 NYAP2Q9P242 653 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 MAD1L1Q9Y6D9 718 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 AP1G2O75843 785 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 GAP43P17677 238 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 CHRNB2P17787 502 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 KRT4P19013 534 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 VCAM1P19320 739 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 TNFRSF8P28908 595 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 LVRNQ6Q4G3 990 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 NETO2Q8NC67 525 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 PARD3BQ8TEW8 1205 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 HSPH1Q92598 858 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 ACCSQ96QU6 501 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 KCNMB3Q9NPA1 279 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 PACSIN3Q9UKS6 424 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 PHTF1Q9UMS5 762 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 NFIBO00712 420 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 RTN2O75298 545 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 GRAP2O75791 330 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 CFHP08603 1231 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 CETPP11597 493 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 CYP11B1P15538 503 aa15.44■□□□□ 0.06
PTPN9-201ENST00000306726 NOVP48745 357 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms