RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 CCDC137Q6PK04 289 aaKnown RBP13.27□□□□□ -0.29
CAGE1-201ENST00000296742 PHC3Q8NDX5 983 aa13.27□□□□□ -0.29
CAGE1-201ENST00000296742 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
CAGE1-201ENST00000296742 TMEM109Q9BVC6 243 aa13.27□□□□□ -0.29
CAGE1-201ENST00000296742 PITPNM3Q9BZ71 974 aa13.27□□□□□ -0.29
CAGE1-201ENST00000296742 ABLIM1O14639 778 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 EXOC3O60645 756 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PHF2O75151 1096 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 QARSP47897 775 aaKnown RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PEX3P56589 373 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 BMT2Q1RMZ1 405 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 RNF43Q68DV7 783 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 MFSD5Q6N075 450 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 ARHGAP22Q7Z5H3 698 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 ZFAND2BQ8WV99 257 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 RFFLQ8WZ73 363 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 CBWD1Q9BRT8 395 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PARP2Q9UGN5 583 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 USP20Q9Y2K6 914 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 GOLGA8IPA6NC78 632 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 GOLGA8JA6NMD2 632 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 SLC16A4O15374 487 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 ACADSP16219 412 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PRKCIP41743 596 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PTGIRP43119 386 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 KCNJ1P48048 391 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 DRG2P55039 364 aaKnown RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 FSTL1Q12841 308 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 RCN2Q14257 317 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 CCDC6Q16204 474 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 HS2ST1Q7LGA3 356 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PRELID2Q8N945 189 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 KIFAP3Q92845 792 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 BORCS6Q96GS4 357 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 FAM84AQ96KN4 292 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 FGD4Q96M96 766 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 RUNDC3BQ96NL0 473 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 TBC1D10AQ9BXI6 508 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 LRMDAQ9H2I8 198 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 E7ENQ6 273 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 NR3C2P08235 984 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 PSMC2P35998 433 aaKnown RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 MARCKSL1P49006 195 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 XKR9Q5GH70 373 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 DCAF15Q66K64 600 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 SRRM1Q8IYB3 904 aaKnown RBP13.26□□□□□ -0.29
CAGE1-201ENST00000296742 LRRC37BQ96QE4 947 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 SCOCQ9UIL1 159 aa13.26□□□□□ -0.29
CAGE1-201ENST00000296742 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 CHRNA3P32297 505 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 MTFR1Q15390 333 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 PARP6Q2NL67 630 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 AGGF1Q8N302 714 aaeCLIP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 FAM210AQ96ND0 272 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 SIX2Q9NPC8 291 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 NMRK1Q9NWW6 199 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 ZNF214Q9UL59 606 aaPredicted RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 PODXLO00592 558 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 RGS20O76081 388 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 CBX6O95503 412 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 BCRP11274 1271 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 USP4Q13107 963 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 KRT35Q92764 455 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 KLRG1Q96E93 195 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 PCMTD2Q9NV79 361 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
CAGE1-201ENST00000296742 FRMD4BQ9Y2L6 1034 aa13.25□□□□□ -0.29
CAGE1-201ENST00000296742 ATP5DP30049 168 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 STAT1P42224 750 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 PPATQ06203 517 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 ZC3H18Q86VM9 953 aaKnown RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 POP1Q99575 1024 aaKnown RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 THAP2Q9H0W7 228 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
CAGE1-201ENST00000296742 GPRC5DQ9NZD1 345 aa13.24□□□□□ -0.29
CAGE1-201ENST00000296742 INTUQ9ULD6 942 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms