RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 MCL1Q07820 350 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 WBP11Q9Y2W2 641 aaKnown RBP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 GGPS1O95749 300 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 TAB1Q15750 504 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 FAM83BQ5T0W9 1011 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CYP4A22Q5TCH4 519 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 EGFL8Q99944 293 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 FAM118BQ9BPY3 351 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 RRN3Q9NYV6 651 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CDC40O60508 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CBFA2T3O75081 653 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 EHD3Q9NZN3 535 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 TCP10Q12799 353 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 DPF2Q92785 391 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 JMJD4Q9H9V9 463 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 ZNF222Q9UK12 451 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CLDN3O15551 220 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 PTPREP23469 700 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 IL31Q6EBC2 164 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 HNRNPLLQ8WVV9 542 aaKnown RBP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 POLG2Q9UHN1 485 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 SPDYAQ5MJ70 313 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 AK8Q96MA6 479 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 EFHC1Q5JVL4 640 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 ZNF624Q9P2J8 865 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 LOC100506127A0A0U1RQW1 187 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 RGS2P41220 211 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 MYBPC2Q14324 1141 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 FUT11Q495W5 492 aa12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-201ENST00000296043 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SLC34A1Q06495 639 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 TMEM120AQ9BXJ8 343 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 ITGAXP20702 1163 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 CHN2P52757 468 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 LRRC74AQ0VAA2 488 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 RRM2BQ7LG56 351 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 ZBTB33Q86T24 672 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 JAMLQ86YT9 394 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 BTBD3Q9Y2F9 522 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 CALB2P22676 271 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 S100A1P23297 94 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 GJB4Q9NTQ9 266 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SRP68Q9UHB9 627 aaKnown RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 MYRFQ9Y2G1 1151 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 WASHC2DQ5SRD0 308 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SIPA1Q96FS4 1042 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 MAST3O60307 1309 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 NCF4Q15080 339 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 KLHL32Q96NJ5 620 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 C11orf70Q9BRQ4 267 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PLCH2O75038 1416 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SRP54P61011 504 aaKnown RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 MARK2Q7KZI7 788 aaKnown RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 TAGLN3Q9UI15 199 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 O00370 1275 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 FOXN1O15353 648 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 STX12Q86Y82 276 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SLC16A1P53985 500 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PTK2BQ14289 1009 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 BBS5Q8N3I7 341 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PSMA8Q8TAA3 256 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 HMG20AQ9NP66 347 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 MYO1DO94832 1006 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 ADAM17P78536 824 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 DRAP1Q14919 205 aaPredicted RBP12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 LRRC6Q86X45 466 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 NDNQ99608 321 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 CTNNAL1Q9UBT7 734 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
SHROOM3-201ENST00000296043 KRT87PA6NCN2 255 aa12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 CCDC182A6NF36 153 aa12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 ATP6V1B2P21281 511 aa12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 OSBPP22059 807 aa12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 EIF2B5Q13144 721 aaKnown RBP12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 RBM44Q6ZP01 1051 aaKnown RBP12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
SHROOM3-201ENST00000296043 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms