RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SLC16A3O15427 465 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 PHF2O75151 1096 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CYP11B1P15538 503 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 MDH1P40925 334 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 SARNPP82979 210 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 OVGP1Q12889 678 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PGM5Q15124 567 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 IRF2BP1Q8IU81 584 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 COPS5Q92905 334 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 FAM136AQ96C01 138 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 MED15Q96RN5 788 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RBM15Q96T37 977 aaKnown RBP eCLIP5.06□□□□□ -1.6
UBR1-201ENST00000290650 TMEM121Q9BTD3 319 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ECT2Q9H8V3 914 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 KCND1Q9NSA2 647 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CTNNAL1Q9UBT7 734 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 REXO2Q9Y3B8 237 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 SCINQ9Y6U3 715 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PHLPP1O60346 1717 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ESYT2A0FGR8 921 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 OPHN1O60890 802 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ATP9AO75110 1047 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 DGAT1O75907 488 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CYP2C8P10632 490 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CHRNA3P32297 505 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ORC2Q13416 577 aaPredicted RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 FAM117BQ6P1L5 589 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 NSMCE1Q8WV22 266 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 KRT35Q92764 455 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 TLR10Q9BXR5 811 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RAB6BQ9NRW1 208 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PPARGC1AQ9UBK2 798 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 TPX2Q9ULW0 747 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 GUCY2CP25092 1073 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 LMNB2Q03252 620 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ARSHQ5FYA8 562 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 XKR3Q5GH77 459 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ATF7IP2Q5U623 682 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CEP128Q6ZU80 1094 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PDCD7Q8N8D1 485 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 C4orf32Q8N8J7 132 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 POLR3CQ9BUI4 534 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 KIF9Q9HAQ2 790 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 FGFR1OP2Q9NVK5 253 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SLC5A4Q9NY91 659 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CFAP69A5D8W1 941 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 DDX3XO00571 662 aaKnown RBP eCLIP5.05□□□□□ -1.6
UBR1-201ENST00000290650 MAP2K7O14733 419 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SH3BP5O60239 455 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CPA2P48052 419 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 BACE1P56817 501 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 MYL6P60660 151 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 RPS6KA2Q15349 733 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 LRRC36Q1X8D7 754 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TMEM119Q4V9L6 283 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 FBXO25Q8TCJ0 367 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 AFG1LQ8WV93 481 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ALKBH8Q96BT7 664 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 CLMNQ96JQ2 1002 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ACAP3Q96P50 834 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TMEM8AQ9HCN3 771 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 XPO7Q9UIA9 1087 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 KCNG1Q9UIX4 513 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 COL1A1P02452 1464 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 MYH1P12882 1939 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 KCPQ6ZWJ8 1503 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 MIF4GDA9UHW6 222 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 LPXNO60711 386 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CXCL8P10145 99 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PYGMP11217 842 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ETS1P14921 441 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PDGFRAP16234 1089 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ROR1Q01973 937 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 POU5F1BQ06416 359 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PPP3CAQ08209 521 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 MMEL1Q495T6 779 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ZNF507Q8TCN5 953 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 HNRNPLLQ8WVV9 542 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 HDAC11Q96DB2 347 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 L3MBTL3Q96JM7 780 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 OSBPL8Q9BZF1 889 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 EIF3HO15372 352 aaKnown RBP eCLIP5.05□□□□□ -1.6
UBR1-201ENST00000290650 CST8O60676 142 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 OATP04181 439 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 C6orf222P0C671 652 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 ZSCAN5DPP0CG00 497 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 BCAR1P56945 870 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ACOT1Q86TX2 421 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CREG2Q8IUH2 290 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SPATA18Q8TC71 538 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 DTX3LQ8TDB6 740 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 LPAR1Q92633 364 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 N4BP2L2Q92802 583 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 TNFRSF25Q93038 417 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 DNAJC19Q96DA6 116 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms