RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ASTN2O75129 1339 aaPredicted RBP13.43□□□□□ -0.26
LIG1-201ENST00000263274 CA4P22748 312 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 GTF2BQ00403 316 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 SETDB1Q15047 1291 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 TRIM68Q6AZZ1 485 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 ARL2BPQ9Y2Y0 163 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 GOLGA8RI6L899 631 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 CAP2P40123 477 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 TAS2R40P59535 323 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 GPS1Q13098 491 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 SIX1Q15475 284 aaPredicted RBP13.43□□□□□ -0.26
LIG1-201ENST00000263274 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 CCDC89Q8N998 374 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 MAIP1Q8WWC4 291 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
LIG1-201ENST00000263274 RMDN2Q96LZ7 410 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
LIG1-201ENST00000263274 NHSQ6T4R5 1651 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 H0Y3Z8 333 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 SGK1O00141 431 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 FSCN2O14926 492 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 KRT16P08779 473 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 CETPP11597 493 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 MAGEA4P43358 317 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 COPS2P61201 443 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 ATP11AP98196 1134 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 IL9RQ01113 521 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 GPD1LQ8N335 351 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 KCTD17Q8N5Z5 321 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 FBF1Q8TES7 1133 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 CD101Q93033 1021 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 TMEM143Q96AN5 459 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 ZBTB45Q96K62 511 aaPredicted RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 KLF6Q99612 283 aaPredicted RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 WHRNQ9P202 907 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 HLA-DRAP01903 254 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 KRT1P04264 644 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 GNA15P30679 374 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 NCALDP61601 193 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 ZBED8Q8IZ13 594 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 ANKRD35Q8N283 1001 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 FITM2Q8N6M3 262 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
LIG1-201ENST00000263274 FAM167BQ9BTA0 163 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 SLCO1B3Q9NPD5 702 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
LIG1-201ENST00000263274 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 DHX15O43143 795 aaKnown RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 CDH16O75309 829 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 BANF1O75531 89 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 CCNE2O96020 404 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 ARSEP51690 589 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 CYP24A1Q07973 514 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 STRN3Q13033 797 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 BAATQ14032 418 aaPredicted RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 FAM151AQ8WW52 585 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 WNK3Q9BYP7 1800 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 MGRN1O60291 552 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 ICAM1P05362 532 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 HADHBP55084 474 aaKnown RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 SCARA5Q6ZMJ2 495 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 ANO5Q75V66 913 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 MICAL1Q8TDZ2 1067 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 PSPC1Q8WXF1 523 aaKnown RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 DCTN4Q9UJW0 460 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.41□□□□□ -0.26
LIG1-201ENST00000263274 AGTPBP1Q9UPW5 1226 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 ASNSP08243 561 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 GLIS1Q8NBF1 620 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 FAXDC2Q96IV6 333 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 SAE1Q9UBE0 346 aaPredicted RBP13.41□□□□□ -0.26
LIG1-201ENST00000263274 NEU2Q9Y3R4 380 aa13.41□□□□□ -0.26
LIG1-201ENST00000263274 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
LIG1-201ENST00000263274 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
LIG1-201ENST00000263274 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
LIG1-201ENST00000263274 DNPEPQ9ULA0 475 aa13.4□□□□□ -0.26
LIG1-201ENST00000263274 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
LIG1-201ENST00000263274 COL24A1Q17RW2 1714 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms