RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 STRNO43815 780 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 ASS1P00966 412 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 PROZP22891 400 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 HSPA9P38646 679 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 CLCN3P51790 818 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 RWDD2BP57060 319 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 PPFIA1Q13136 1202 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 TRPC3Q13507 836 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 SGSM1Q2NKQ1 1148 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF568Q3ZCX4 644 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 DDX42Q86XP3 938 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 SEC14L1Q92503 715 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 LRRC45Q96CN5 670 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 ZIM3Q96PE6 472 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 MTMR12Q9C0I1 747 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 RASAL2Q9UJF2 1139 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 MTUS1Q9ULD2 1270 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 ANK1P16157 1881 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 UMODL1Q5DID0 1318 aa13.81□□□□□ -0.2
SPTLC1-201ENST00000262554 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 STK25O00506 426 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 DAPK3O43293 454 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 THAP12O43422 761 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PHF2O75151 1096 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 C22orf31O95567 290 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 LGALS2P05162 132 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 GJB1P08034 283 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 TMEM191BP0C7N4 346 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PYGMP11217 842 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 RRM1P23921 792 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 ECHS1P30084 290 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 CHRNA3P32297 505 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 SLC1A1P43005 524 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PHKA2P46019 1235 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 CCL15Q16663 113 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 AADACL2Q6P093 401 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MON1BQ7L1V2 547 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 THNSL1Q8IYQ7 743 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 VCPIP1Q96JH7 1222 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PTPRHQ9HD43 1115 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MYO1FO00160 1098 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MAGEB2O15479 319 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 CST3P01034 146 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 TNNC2P02585 160 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 INSRRP14616 1297 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MYL6P60660 151 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 NOMO3P69849 1222 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 IGBP1P78318 339 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 IQCKQ8N0W5 287 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 FAM76AQ8TAV0 307 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 ANKRD36BP1Q96IX9 119 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 PRMT7Q9NVM4 692 aaPredicted RBP13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 TNFSF13BQ9Y275 285 aa13.8□□□□□ -0.2
SPTLC1-201ENST00000262554 MROH7Q68CQ1 1323 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 ERICH4A6NGS2 130 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 IL18RAPO95256 599 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 HOXC6P09630 235 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF132P52740 706 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 POU5F1BQ06416 359 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 GPR162Q16538 588 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 PHF13Q86YI8 300 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 SLC13A5Q86YT5 568 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 UBR7Q8N806 425 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 RUNDC3BQ96NL0 473 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 ERP44Q9BS26 406 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 ADAM22Q9P0K1 906 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 SCINQ9Y6U3 715 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 MGAMO43451 1857 aa13.79□□□□□ -0.2
SPTLC1-201ENST00000262554 COL1A2P08123 1366 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 B4GALT5O43286 388 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 B4GALT4O60513 344 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 OSTNP61366 133 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms