RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RNF217Q8TC41 542 aa24.06■■□□□ 1.44
MCF2L-201ENST00000261963 SMNDC1O75940 238 aaKnown RBP eCLIP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 NQO1P15559 274 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 ATP4AP20648 1035 aa24.06■■□□□ 1.44
MCF2L-201ENST00000261963 RPL21P46778 160 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 CLDN10P78369 228 aa24.06■■□□□ 1.44
MCF2L-201ENST00000261963 SF3A3Q12874 501 aaKnown RBP eCLIP24.06■■□□□ 1.445e-9■■■■■ 39.6
MCF2L-201ENST00000261963 CCDC137Q6PK04 289 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 CATSPERGQ6ZRH7 1159 aa24.06■■□□□ 1.44
MCF2L-201ENST00000261963 ATXN2LQ8WWM7 1075 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 PSPC1Q8WXF1 523 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 ELAC2Q9BQ52 826 aaKnown RBP24.06■■□□□ 1.44
MCF2L-201ENST00000261963 EXTL3O43909 919 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 DIAPH2O60879 1101 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 ZC3H11AO75152 810 aaKnown RBP eCLIP24.05■■□□□ 1.44
MCF2L-201ENST00000261963 SUPT20HL2P0C7V6 817 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 RARAP10276 462 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 BAG6P46379 1132 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 SUPT20HL1Q3ZLR7 823 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 XKR3Q5GH77 459 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 MIS18BP1Q6P0N0 1132 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 ENOSF1Q7L5Y1 443 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 MICAL1Q8TDZ2 1067 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 EME2A4GXA9 379 aaPredicted RBP24.05■■□□□ 1.44
MCF2L-201ENST00000261963 ZBTB7AO95365 584 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 UNGP13051 313 aaPredicted RBP24.05■■□□□ 1.44
MCF2L-201ENST00000261963 CCND1P24385 295 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 MMP13P45452 471 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 INHBEP58166 350 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 EMC2Q15006 297 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 AGAP1Q9UPQ3 857 aa24.05■■□□□ 1.44
MCF2L-201ENST00000261963 C19orf81C9J6K1 198 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 COILP38432 576 aaPredicted RBP24.04■■□□□ 1.44
MCF2L-201ENST00000261963 RWDD2BP57060 319 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 NLRP11P59045 1033 aaKnown RBP24.04■■□□□ 1.44
MCF2L-201ENST00000261963 AP1ARQ63HQ0 302 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 CHADLQ6NUI6 762 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 CYFIP1Q7L576 1253 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 HAPLN2Q9GZV7 340 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 CORO1CQ9ULV4 474 aaPredicted RBP24.04■■□□□ 1.44
MCF2L-201ENST00000261963 KLHL33A6NCF5 533 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 STAM2O75886 525 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 SHBGP04278 402 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 LIG4P49917 911 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 PSMD6Q15008 389 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
MCF2L-201ENST00000261963 TMEM143Q96AN5 459 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 TRIM7Q9C029 511 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 NSRP1Q9H0G5 558 aaKnown RBP24.04■■□□□ 1.44
MCF2L-201ENST00000261963 C1orf112Q9NSG2 853 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 STYXL1Q9Y6J8 313 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 PTPRJQ12913 1337 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 MYPNQ86TC9 1320 aa24.04■■□□□ 1.44
MCF2L-201ENST00000261963 FZD9O00144 591 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 PODXLO00592 558 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 NUDT17P0C025 328 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 PMS2P54278 862 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 GNPTABQ3T906 1256 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 ZACNQ401N2 412 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 DHX37Q8IY37 1157 aaKnown RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 ASAP3Q8TDY4 903 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 RNF25Q96BH1 459 aaPredicted RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 PABPC3Q9H361 631 aaKnown RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 SPDYE16A6NNV3 312 aaPredicted RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 H0YCG3 227 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 LIN7AO14910 233 aaPredicted RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 KCNJ2P63252 427 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 ADCY2Q08462 1091 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 FSTL1Q12841 308 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 TDRD10Q5VZ19 366 aaKnown RBP24.03■■□□□ 1.44
MCF2L-201ENST00000261963 MCOLN2Q8IZK6 566 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 PGM2Q96G03 612 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 SLC5A4Q9NY91 659 aa24.03■■□□□ 1.44
MCF2L-201ENST00000261963 HLA-DRAP01903 254 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 C4BPAP04003 597 aaKnown RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 VIMP08670 466 aaKnown RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 C12orf50Q8NA57 414 aaPredicted RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 KIAA1586Q9HCI6 787 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 ABCF3Q9NUQ8 709 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 INTS9Q9NV88 658 aaKnown RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 ANAPC7Q9UJX3 599 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 MTUS1Q9ULD2 1270 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 MAFBQ9Y5Q3 323 aaPredicted RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 KCNJ1P48048 391 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 ACOT2P49753 483 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 ALDH5A1P51649 535 aaPredicted RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 POLGP54098 1239 aaPredicted RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 UBAP2Q5T6F2 1119 aaKnown RBP24.02■■□□□ 1.44
MCF2L-201ENST00000261963 KLRG1Q96E93 195 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 MROH7Q68CQ1 1323 aa24.02■■□□□ 1.44
MCF2L-201ENST00000261963 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.43
MCF2L-201ENST00000261963 CLDN3O15551 220 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 VNN1O95497 513 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 GLRA2P23416 452 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 NCALDP61601 193 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 SPOPLQ6IQ16 392 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 PRMT1Q99873 361 aaKnown RBP24.01■■□□□ 1.43
MCF2L-201ENST00000261963 ADAM7Q9H2U9 754 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 CCDC134Q9H6E4 229 aa24.01■■□□□ 1.43
MCF2L-201ENST00000261963 AVENQ9NQS1 362 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms