RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 GFAPP14136 432 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 MAP4P27816 1152 aaKnown RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 LY6KQ17RY6 165 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SNF8Q96H20 258 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CHP1Q99653 195 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 FDX1P10109 184 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 P3H1Q32P28 736 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 GIPC2Q8TF65 315 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 H0Y626 953 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 RGS2P41220 211 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 STK4Q13043 487 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 MIB1Q86YT6 1006 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 TRIM55Q9BYV6 548 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 BFARQ9NZS9 450 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 MEFVO15553 781 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 SLC25A27O95847 323 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 MYBL1P10243 752 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 PBLDP30039 288 aaPredicted RBP12.8□□□□□ -0.36
SPG11-201ENST00000261866 ARHGEF7Q14155 803 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 SPDYE7PQ495Y7 208 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 FRMD5Q7Z6J6 570 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
SPG11-201ENST00000261866 CASTOR2A6NHX0 329 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 RTN2O75298 545 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 FMO5P49326 533 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 POLE2P56282 527 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 GRIN1Q05586 938 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 PLEKHH3Q7Z736 793 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 GUF1Q8N442 669 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 DDX50Q9BQ39 737 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 CSF1RP07333 972 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 HPDLQ96IR7 371 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 POP1Q99575 1024 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■■□ 19.3
SPG11-201ENST00000261866 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 MIF4GDA9UHW6 222 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 TMCC1O94876 653 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 SV2CQ496J9 727 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 IRX2Q9BZI1 471 aaPredicted RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 WDR19Q8NEZ3 1342 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 TKFCQ3LXA3 575 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 MFSD4BQ5TF39 518 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 FBXO38Q6PIJ6 1188 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 RNF14Q9UBS8 474 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 MID2Q9UJV3 735 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 CHSY1Q86X52 802 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 EFHD1Q9BUP0 239 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 MAPK13O15264 365 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 FLOT2Q14254 428 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 SGSM1Q2NKQ1 1148 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 NOTUMQ6P988 496 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 WDR75Q8IWA0 830 aaKnown RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 SNX31Q8N9S9 440 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 SCFD2Q8WU76 684 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 MAGEB10Q96LZ2 347 aaPredicted RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 WNT8AQ9H1J5 351 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 DPP3Q9NY33 737 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
SPG11-201ENST00000261866 TIMM13Q9Y5L4 95 aaPredicted RBP12.79□□□□□ -0.36
SPG11-201ENST00000261866 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 ARP10275 920 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 CYP2C8P10632 490 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 VCAM1P19320 739 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 CAP2P40123 477 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 DACH2Q96NX9 599 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 USP20Q9Y2K6 914 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 LRRC74AQ0VAA2 488 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 SDE2Q6IQ49 451 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
SPG11-201ENST00000261866 NFKBIL1Q9UBC1 381 aaPredicted RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 A0A087WUV0 522 aaPredicted RBP12.78□□□□□ -0.36
SPG11-201ENST00000261866 DDTLA6NHG4 134 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms