RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CYP3A5P20815 502 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 GATMP50440 423 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 DEFB103AP81534 67 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 TRIM14Q14142 442 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 FAM117BQ6P1L5 589 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 CACNA2D4Q7Z3S7 1137 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 GSTCDQ8NEC7 633 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 HERVK_113Q902F9 699 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 FAM193BQ96PV7 902 aaPredicted RBP16.79■□□□□ 0.28
GYPC-201ENST00000259254 GOLGA2P5Q9HBQ8 144 aa16.79■□□□□ 0.28
GYPC-201ENST00000259254 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
GYPC-201ENST00000259254 LRRN2O75325 713 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 CST3P01034 146 aaPredicted RBP16.78■□□□□ 0.28
GYPC-201ENST00000259254 POLR2FP61218 127 aaKnown RBP16.78■□□□□ 0.28
GYPC-201ENST00000259254 SOX4Q06945 474 aaPredicted RBP16.78■□□□□ 0.28
GYPC-201ENST00000259254 SGSM1Q2NKQ1 1148 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 KLHDC7AQ5VTJ3 777 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 LMO3Q8TAP4 145 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
GYPC-201ENST00000259254 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
GYPC-201ENST00000259254 PLCB1Q9NQ66 1216 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 KANSL3Q9P2N6 904 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
GYPC-201ENST00000259254 CASTOR2A6NHX0 329 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 EPHB6O15197 1021 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 INPPL1O15357 1258 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.284e-6■■□□□ 11.7
GYPC-201ENST00000259254 DNAJB2P25686 324 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
GYPC-201ENST00000259254 MYO1EQ12965 1108 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 TUSC3Q13454 348 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 RAPGEF1Q13905 1077 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 PAN2Q504Q3 1202 aaKnown RBP16.77■□□□□ 0.28
GYPC-201ENST00000259254 C9orf57Q5W0N0 161 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 SPOPLQ6IQ16 392 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 GJB7Q6PEY0 223 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 TMCO2Q7Z6W1 182 aaPredicted RBP16.77■□□□□ 0.28
GYPC-201ENST00000259254 ARHGEF19Q8IW93 802 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 PPM1KQ8N3J5 372 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 TAF4BQ92750 862 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 HPDLQ96IR7 371 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 MRPL9Q9BYD2 267 aaKnown RBP16.77■□□□□ 0.28
GYPC-201ENST00000259254 GANQ9H2C0 597 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 SIX2Q9NPC8 291 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 UBE2TQ9NPD8 197 aaPredicted RBP16.77■□□□□ 0.28
GYPC-201ENST00000259254 NLRC4Q9NPP4 1024 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 TBC1D13Q9NVG8 400 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 IMPACTQ9P2X3 320 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 APEX2Q9UBZ4 518 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.28
GYPC-201ENST00000259254 PODXLO00592 558 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 PPEF2O14830 753 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 ASS1P00966 412 aaKnown RBP16.76■□□□□ 0.27
GYPC-201ENST00000259254 ATICP31939 592 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 CASP14P31944 242 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 FIGNQ5HY92 759 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 ZNF667Q5HYK9 610 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 RRAGAQ7L523 313 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 LRRC52Q8N7C0 313 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
GYPC-201ENST00000259254 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 UROC1Q96N76 676 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 CASD1Q96PB1 797 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 SPAG5Q96R06 1193 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
GYPC-201ENST00000259254 CEP72Q9P209 647 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 CACNG4Q9UBN1 327 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 NXF1Q9UBU9 619 aaKnown RBP16.76■□□□□ 0.27
GYPC-201ENST00000259254 FHOD1Q9Y613 1164 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 COL6A3P12111 3177 aa16.76■□□□□ 0.27
GYPC-201ENST00000259254 TET1Q8NFU7 2136 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
GYPC-201ENST00000259254 NOL4O94818 638 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 GYPCP04921 128 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 P4HA1P13674 534 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 UCHL3P15374 230 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 RFX1P22670 979 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 LRPAP1P30533 357 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 RPL9P32969 192 aaKnown RBP16.75■□□□□ 0.27
GYPC-201ENST00000259254 PNPLA4P41247 253 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 CLCNKBP51801 687 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 MFAP3P55082 362 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 TNNC1P63316 161 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 TBX2Q13207 712 aaPredicted RBP16.75■□□□□ 0.27
GYPC-201ENST00000259254 NAB2Q15742 525 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 ARHGAP44Q17R89 818 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 SCARA5Q6ZMJ2 495 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 ZNF280BQ86YH2 543 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 CRIPAKQ8N1N5 446 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 LRRC43Q8N309 656 aa16.75■□□□□ 0.27
GYPC-201ENST00000259254 CXorf38Q8TB03 319 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms