RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 RCCD1A6NED2 376 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 FANCGO15287 622 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 ARF4P18085 180 aaPredicted RBP18.8■□□□□ 0.6
SRSF1-201ENST00000258962 TNNI1P19237 187 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 SOX5P35711 763 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 STAT1P42224 750 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 KRT83P78385 493 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 TMEM132AQ24JP5 1023 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 TDRD10Q5VZ19 366 aaKnown RBP18.8■□□□□ 0.6
SRSF1-201ENST00000258962 SYT10Q6XYQ8 523 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 Q7L0L9 218 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 CPB2Q96IY4 423 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 NKX2-4Q9H2Z4 354 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 DEF6Q9H4E7 631 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 HAUS4Q9H6D7 363 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 ERVK-5Q9HDB9 667 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 UBE2TQ9NPD8 197 aaPredicted RBP18.8■□□□□ 0.6
SRSF1-201ENST00000258962 TFR2Q9UP52 801 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 PAXBP1Q9Y5B6 917 aa18.8■□□□□ 0.6
SRSF1-201ENST00000258962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 AKR1B10O60218 316 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 GFPT2O94808 682 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 UPP2O95045 317 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 GJB5O95377 273 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 DARSP14868 501 aaKnown RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 FERP16591 822 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ENOX2Q16206 610 aaKnown RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ARHGAP44Q17R89 818 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 THNSL1Q8IYQ7 743 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 OR5B17Q8NGF7 314 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ZNF592Q92610 1267 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 KAT5Q92993 513 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 TOP1MTQ969P6 601 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 FAM161BQ96MY7 647 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 RAD9AQ99638 391 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 IRX2Q9BZI1 471 aaPredicted RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.63e-6■■■□□ 19.1
SRSF1-201ENST00000258962 TRIM10Q9UDY6 481 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 YBX2Q9Y2T7 364 aaKnown RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 R3HCC1Q9Y3T6 440 aaKnown RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 VNN1O95497 513 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 MCF2P10911 925 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 MYOGP15173 224 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 FGFR4P22455 802 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 PTK2Q05397 1052 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ZNF662Q6ZS27 426 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ZNF571Q7Z3V5 609 aaPredicted RBP18.79■□□□□ 0.6
SRSF1-201ENST00000258962 FAM228AQ86W67 206 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 OLIG1Q8TAK6 271 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 HELQQ8TDG4 1101 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ELMO3Q96BJ8 720 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
SRSF1-201ENST00000258962 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 CITO14578 2027 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 MEFVO15553 781 aaPredicted RBP18.78■□□□□ 0.6
SRSF1-201ENST00000258962 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
SRSF1-201ENST00000258962 HLA-DRAP01903 254 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 VAV2P52735 878 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 SPA17Q15506 151 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 ARHGAP29Q52LW3 1261 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 PPP2R2DQ66LE6 453 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 KIAA1328Q86T90 577 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 WDR49Q8IV35 697 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 NT5C1BQ96P26 610 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 PI4K2AQ9BTU6 479 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 LACRTQ9GZZ8 138 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 TSPYL2Q9H2G4 693 aaPredicted RBP18.78■□□□□ 0.6
SRSF1-201ENST00000258962 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
SRSF1-201ENST00000258962 INSL6Q9Y581 213 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 PCDHA13Q9Y5I0 950 aa18.78■□□□□ 0.6
SRSF1-201ENST00000258962 BZW2Q9Y6E2 419 aaKnown RBP18.78■□□□□ 0.6
SRSF1-201ENST00000258962 MICAL3Q7RTP6 2002 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 A0A087X0T9 212 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 FOXN3O00409 490 aaPredicted RBP18.77■□□□□ 0.6
SRSF1-201ENST00000258962 ZC3H11AO75152 810 aaKnown RBP eCLIP18.77■□□□□ 0.6
SRSF1-201ENST00000258962 ERLIN2O94905 339 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 CA3P07451 260 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 FAM228BP0C875 321 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 ZSCAN20P17040 1043 aaPredicted RBP18.77■□□□□ 0.6
SRSF1-201ENST00000258962 OSTNP61366 133 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 SLC18A3Q16572 532 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 RTN4RL1Q86UN2 441 aaPredicted RBP18.77■□□□□ 0.6
SRSF1-201ENST00000258962 TATDN2Q93075 761 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 WDR24Q96S15 920 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 YME1L1Q96TA2 773 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 ADAM2Q99965 735 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 SYT11Q9BT88 431 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 MTMR10Q9NXD2 777 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 DNAI1Q9UI46 699 aa18.77■□□□□ 0.6
SRSF1-201ENST00000258962 A0A1B0GUA9 196 aa18.76■□□□□ 0.59
SRSF1-201ENST00000258962 STAG3L1P0CL83 205 aa18.76■□□□□ 0.59
SRSF1-201ENST00000258962 CXCL8P10145 99 aa18.76■□□□□ 0.59
SRSF1-201ENST00000258962 PIK3CAP42336 1068 aa18.76■□□□□ 0.59
SRSF1-201ENST00000258962 GNG11P61952 73 aa18.76■□□□□ 0.59
SRSF1-201ENST00000258962 BIRC3Q13489 604 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms