RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FAM71AQ8IYT1 594 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 CEP120Q8N960 986 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 EPS8L1Q8TE68 723 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 BSNDQ8WZ55 320 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 MAGEB18Q96M61 343 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 ANKRD27Q96NW4 1050 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 TCEAL9Q9UHQ7 104 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 NOCTQ9UK39 431 aaKnown RBP20.14■□□□□ 0.82
SNX4-201ENST00000251775 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.14■□□□□ 0.82
SNX4-201ENST00000251775 USP20Q9Y2K6 914 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 PMM2O15305 246 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 ECEL1O95672 775 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 STX2P32856 288 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 SOX10P56693 466 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 MCCD1P59942 119 aaPredicted RBP20.14■□□□□ 0.81
SNX4-201ENST00000251775 GPC5P78333 572 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 ACVR2BQ13705 512 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 C12orf50Q8NA57 414 aaPredicted RBP20.14■□□□□ 0.81
SNX4-201ENST00000251775 CCDC127Q96BQ5 260 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 WNT8AQ9H1J5 351 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 ZFATQ9P243 1243 aa20.14■□□□□ 0.81
SNX4-201ENST00000251775 CNGA1P29973 690 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 TNFAIP1Q13829 316 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
SNX4-201ENST00000251775 CYP4X1Q8N118 509 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 PPM1KQ8N3J5 372 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 RAB3IPQ96QF0 476 aaPredicted RBP20.13■□□□□ 0.81
SNX4-201ENST00000251775 OSBPL1AQ9BXW6 950 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 YIPF3Q9GZM5 350 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 RNF146Q9NTX7 359 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 WHRNQ9P202 907 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 EIF4E1BA6NMX2 242 aaKnown RBP20.13■□□□□ 0.81
SNX4-201ENST00000251775 CYP26A1O43174 497 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
SNX4-201ENST00000251775 SLC47A2Q86VL8 602 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 MAP4K3Q8IVH8 894 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 LRRC19Q9H756 370 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 TELO2Q9Y4R8 837 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
SNX4-201ENST00000251775 RLFQ13129 1914 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 DENND3A2RUS2 1198 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 TTC4O95801 387 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 TAC1P20366 129 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 SARNPP82979 210 aaKnown RBP20.12■□□□□ 0.81
SNX4-201ENST00000251775 SLC39A4Q6P5W5 647 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 PARD3BQ8TEW8 1205 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 JDP2Q8WYK2 163 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 TOPORSQ9NS56 1045 aaPredicted RBP20.12■□□□□ 0.81
SNX4-201ENST00000251775 EXOC7Q9UPT5 735 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 LRRC42Q9Y546 428 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 ZNF862O60290 1169 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 FOXN2P32314 431 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 PARP6Q2NL67 630 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 NBPF12Q5TAG4 269 aaPredicted RBP20.12■□□□□ 0.81
SNX4-201ENST00000251775 SEPT14Q6ZU15 432 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 SAMD7Q7Z3H4 446 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 VSIG10LQ86VR7 867 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 SLC17A8Q8NDX2 589 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 FBF1Q8TES7 1133 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 SHC3Q92529 594 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 ELMO3Q96BJ8 720 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 SH3GL3Q99963 347 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 MYLK2Q9H1R3 596 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 RNPEPL1Q9HAU8 725 aa20.12■□□□□ 0.81
SNX4-201ENST00000251775 ZMYND8Q9ULU4 1186 aaPredicted RBP20.12■□□□□ 0.81
SNX4-201ENST00000251775 ATMINO43313 823 aaPredicted RBP20.11■□□□□ 0.81
SNX4-201ENST00000251775 PEX11AO75192 247 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 CETPP11597 493 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 KRT17Q04695 432 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 DMP1Q13316 513 aaPredicted RBP20.11■□□□□ 0.81
SNX4-201ENST00000251775 KYNUQ16719 465 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 SPDYE1Q8NFV5 336 aaPredicted RBP20.11■□□□□ 0.81
SNX4-201ENST00000251775 LRMDAQ9H2I8 198 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 KMT5AQ9NQR1 393 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 GINM1Q9NU53 330 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 TXLNGQ9NUQ3 528 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 DNAJC17Q9NVM6 304 aaKnown RBP20.11■□□□□ 0.81
SNX4-201ENST00000251775 GABBR1Q9UBS5 961 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 PCDHA10Q9Y5I2 948 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 MTA2O94776 668 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 UPP2O95045 317 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 STBD1O95210 358 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 NR3C2P08235 984 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 FMO1Q01740 532 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 KRT39Q6A163 491 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 ARHGEF18Q6ZSZ5 1173 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 NLRX1Q86UT6 975 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 TEX9Q8N6V9 391 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 HELQQ8TDG4 1101 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 MORC4Q8TE76 937 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 SLCO2A1Q92959 643 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 BTBD6Q96KE9 485 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 PIM2Q9P1W9 311 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 COQ4Q9Y3A0 265 aa20.11■□□□□ 0.81
SNX4-201ENST00000251775 TCEA3O75764 348 aa20.1■□□□□ 0.81
SNX4-201ENST00000251775 DLATP10515 647 aaKnown RBP20.1■□□□□ 0.81
SNX4-201ENST00000251775 CALB2P22676 271 aa20.1■□□□□ 0.81
SNX4-201ENST00000251775 MFAP3P55082 362 aa20.1■□□□□ 0.81
SNX4-201ENST00000251775 LLGL1Q15334 1064 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms