RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 CLDN10P78369 228 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 TDRD10Q5VZ19 366 aaKnown RBP19.9■□□□□ 0.78
CPSF3-201ENST00000238112 SPOPLQ6IQ16 392 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 GSTA5Q7RTV2 222 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 MAGEC3Q8TD91 643 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 PWWP2AQ96N64 755 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 FAM118BQ9BPY3 351 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 OSBPL8Q9BZF1 889 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 CYP26B1Q9NR63 512 aa19.9■□□□□ 0.78
CPSF3-201ENST00000238112 GSTTP1A0A1W2PQM5 241 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 CFAP73A6NFT4 308 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 STBD1O95210 358 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 PRKCEQ02156 737 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 STRN3Q13033 797 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 IZUMO3Q5VZ72 239 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 NIM1KQ8IY84 436 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 KATNAL2Q8IYT4 538 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 GDAP1Q8TB36 358 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 CKAP2Q8WWK9 683 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 PDLIM7Q9NR12 457 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 TBK1Q9UHD2 729 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 ZNRF3Q9ULT6 936 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 USTQ9Y2C2 406 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 NEU2Q9Y3R4 380 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 PCDHB4Q9Y5E5 795 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 SCINQ9Y6U3 715 aa19.89■□□□□ 0.77
CPSF3-201ENST00000238112 O00370 1275 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 VWA5AO00534 786 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 CDH16O75309 829 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 C4BPAP04003 597 aaKnown RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 GNA15P30679 374 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 SLC8A1P32418 973 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 TAS2R40P59535 323 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 MAMLD1Q13495 774 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 CUL2Q13617 745 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 PREPLQ4J6C6 727 aaPredicted RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 FAM228AQ86W67 206 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 ZBED3Q96IU2 234 aaPredicted RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 JPH1Q9HDC5 661 aaPredicted RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 AGO2Q9UKV8 859 aaKnown RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 FOXO6A8MYZ6 492 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 FDX1P10109 184 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 KCNA2P16389 499 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 CD58P19256 250 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 STX2P32856 288 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 DSG3P32926 999 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 CETN2P41208 172 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 ACOT2P49753 483 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 GSCP56915 257 aaPredicted RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 NLRP11P59045 1033 aaKnown RBP19.88■□□□□ 0.77
CPSF3-201ENST00000238112 TMEM270Q6UE05 265 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 ARHGEF18Q6ZSZ5 1173 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 ABRAQ8N0Z2 381 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 ATG4CQ96DT6 458 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 NKIRAS1Q9NYS0 192 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 LGALS13Q9UHV8 139 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 RIPK3Q9Y572 518 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 COL4A5P29400 1685 aa19.88■□□□□ 0.77
CPSF3-201ENST00000238112 TLR3O15455 904 aaKnown RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 NOMO3P69849 1222 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 STAT4Q14765 748 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 CEP128Q6ZU80 1094 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 CCDC60Q8IWA6 550 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 EXD1Q8NHP7 514 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 VCPIP1Q96JH7 1222 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 MYOZ2Q9NPC6 264 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 SLC9A2Q9UBY0 812 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 KCNG1Q9UIX4 513 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 UBOX5O94941 541 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 CFHP08603 1231 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 ACO1P21399 889 aaKnown RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 MTERF2Q49AM1 385 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 SPATA21Q7Z572 469 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 TBC1D1Q86TI0 1168 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 SRRM1Q8IYB3 904 aaKnown RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 CYP4X1Q8N118 509 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 GBP7Q8N8V2 638 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 TCP11Q8WWU5 503 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 C9orf72Q96LT7 481 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 TGS1Q96RS0 853 aaKnown RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 MYCBPQ99417 103 aaPredicted RBP19.87■□□□□ 0.77
CPSF3-201ENST00000238112 PLCD4Q9BRC7 762 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 GGT7Q9UJ14 662 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 NAALADL1Q9UQQ1 740 aa19.87■□□□□ 0.77
CPSF3-201ENST00000238112 ATP6V1G2O95670 118 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 GH1P01241 217 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 EZRP15311 586 aaKnown RBP19.86■□□□□ 0.77
CPSF3-201ENST00000238112 SSTR3P32745 418 aaPredicted RBP19.86■□□□□ 0.77
CPSF3-201ENST00000238112 WNT7BP56706 349 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 LMNB2Q03252 620 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 MKRN3Q13064 507 aaKnown RBP19.86■□□□□ 0.77
CPSF3-201ENST00000238112 ZFYVE27Q5T4F4 411 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 WLSQ5T9L3 541 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 PPP1R2P3Q6NXS1 205 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 RELL1Q8IUW5 271 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 NSUN6Q8TEA1 469 aaKnown RBP19.86■□□□□ 0.77
CPSF3-201ENST00000238112 WNK4Q96J92 1243 aa19.86■□□□□ 0.77
CPSF3-201ENST00000238112 GINM1Q9NU53 330 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms