RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 TNFSF9P41273 254 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 RBM10P98175 930 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 CREMQ03060 361 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 TMEM132DQ14C87 1099 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 USP41Q3LFD5 358 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 ZNF658Q5TYW1 1059 aaPredicted RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 USP37Q86T82 979 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 GUF1Q8N442 669 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 XXYLT1Q8NBI6 393 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 KIAA0895Q8NCT3 520 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 NOC3LQ8WTT2 800 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 CBWD1Q9BRT8 395 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 MRPL17Q9NRX2 175 aaKnown RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 RBAKQ9NYW8 714 aaPredicted RBP12.23□□□□□ -0.45
SF3B6-201ENST00000233468 HSPBP1Q9NZL4 362 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 CLEC1BQ9P126 229 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 PRKAG3Q9UGI9 489 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 PCDHA5Q9Y5H7 936 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 ARHGEF37A1IGU5 675 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TISP43B9A030 160 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
SF3B6-201ENST00000233468 PODXLO00592 558 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 FSCN2O14926 492 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TGFB1I1O43294 461 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 EXOC3O60645 756 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 CXCL14O95715 111 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 CTSAP10619 480 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 CA8P35219 290 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 NAB2Q15742 525 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 UPP1Q16831 310 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 COBLL1Q53SF7 1204 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 RNF135Q8IUD6 432 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 BRSK2Q8IWQ3 736 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 GLIS3Q8NEA6 775 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 SPATA20Q8TB22 786 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TMEM174Q8WUU8 243 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 SAAL1Q96ER3 474 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TSG101Q99816 390 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 HERC2P3Q9BVR0 1158 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 TLE6Q9H808 572 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.22□□□□□ -0.45
SF3B6-201ENST00000233468 FAM50BQ9Y247 325 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 NUB1Q9Y5A7 615 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
SF3B6-201ENST00000233468 CLIC2O15247 247 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 GLP2RO95838 553 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 HOXD13P35453 343 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 NRIP1P48552 1158 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 GLUD2P49448 558 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 CYP2J2P51589 502 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 CLCNKBP51801 687 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ERVFC1P60507 584 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ZBTB41Q5SVQ8 909 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 SPATA1Q5VX52 437 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 JADE1Q6IE81 842 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 FUT10Q6P4F1 479 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ELMSAN1Q6PJG2 1045 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.45
SF3B6-201ENST00000233468 SLC9A9Q8IVB4 645 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 MRPL43Q8N983 215 aaKnown RBP12.21□□□□□ -0.45
SF3B6-201ENST00000233468 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ZBP1Q9H171 429 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 MARCH5Q9NX47 278 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 CD207Q9UJ71 328 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.45
SF3B6-201ENST00000233468 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 MYO10Q9HD67 2058 aa12.21□□□□□ -0.45
SF3B6-201ENST00000233468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.2□□□□□ -0.46
SF3B6-201ENST00000233468 GOLGA8IPA6NC78 632 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 GOLGA8JA6NMD2 632 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 PSMA7O14818 248 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 PER2O15055 1255 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 B4GALT3O60512 393 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 KIF4AO95239 1232 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 MBD3O95983 291 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 LRPAP1P30533 357 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 PNPLA4P41247 253 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 NDUFV1P49821 464 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 AP3M2P53677 418 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 NHLH1Q02575 133 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 SMAD4Q13485 552 aaKnown RBP12.2□□□□□ -0.46
SF3B6-201ENST00000233468 ZBTB6Q15916 424 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 NFIL3Q16649 462 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 CRELD2Q6UXH1 353 aaPredicted RBP12.2□□□□□ -0.46
SF3B6-201ENST00000233468 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
SF3B6-201ENST00000233468 APPL2Q8NEU8 664 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms