RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 BMP3P12645 472 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 RRM1P23921 792 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 ANXA13P27216 316 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 GRAPQ13588 217 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 ZNF720Q7Z2F6 126 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 FBXO11Q86XK2 927 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 GRAPLQ8TC17 118 aaPredicted RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SNF8Q96H20 258 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 TTC1Q99614 292 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 WNT8AQ9H1J5 351 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 CLIC5Q9NZA1 410 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 GTPBP10A4D1E9 387 aaKnown RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SLITRK3O94933 977 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 IFNB1P01574 187 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 MTFR1Q15390 333 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 CCDC174Q6PII3 467 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 CPA5Q8WXQ8 436 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 A0A0G2JND7 137 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 ARHGEF35A5YM69 484 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 PI4K2BG5E9Z4 385 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 GAS7O60861 476 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SNHG28P0DPA3 235 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SHMT1P34896 483 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 KPNB1Q14974 876 aaKnown RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SH2D4BQ5SQS7 431 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 MFSD5Q6N075 450 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 DSTYKQ6XUX3 929 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 LRRC74BQ6ZQY2 392 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 MAP7D3Q8IWC1 876 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 MAGEB18Q96M61 343 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 PI4K2AQ9BTU6 479 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 DDX18Q9NVP1 670 aaKnown RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 LARSQ9P2J5 1176 aaKnown RBP14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 SLC4A7Q9Y6M7 1214 aa14.99□□□□□ -0.01
PCDHB3-201ENST00000231130 RBM47A0AV96 593 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 CFAP69A5D8W1 941 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ZSCAN5DPP0CG00 497 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 CD58P19256 250 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 VAMP7P51809 220 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PLCB3Q01970 1234 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 TAF1BQ53T94 588 aaPredicted RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 IZUMO3Q5VZ72 239 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 RIBC1Q8N443 379 aaPredicted RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ARHGEF1Q92888 912 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 LENG9Q96B70 501 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 MPP4Q96JB8 637 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 RBM15Q96T37 977 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 FAM47DPA6NHR8 397 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 BANF1O75531 89 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ATP5HO75947 161 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 TMCC1O94876 653 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 HLA-DOAP06340 250 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 MTDHQ86UE4 582 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PASD1Q8IV76 773 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ARHGAP18Q8N392 663 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PTPRN2Q92932 1015 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 NAP1L4Q99733 375 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 PAIP2BQ9ULR5 123 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 CDH16O75309 829 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 RALAP11233 206 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 MXI1P50539 228 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 INHBCP55103 352 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 RTP1P59025 263 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ANKRD23Q86SG2 305 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 SLF2Q8IX21 1173 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 SYT11Q9BT88 431 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 TOPORSQ9NS56 1045 aaPredicted RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 WRAP73Q9P2S5 460 aaPredicted RBP14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 NARFQ9UHQ1 456 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ZFP69BQ9UJL9 534 aa14.98□□□□□ -0.01
PCDHB3-201ENST00000231130 ETS1P14921 441 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 ATF7P17544 494 aaPredicted RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 GAP43P17677 238 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 RPA3P35244 121 aaPredicted RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 NEK3P51956 506 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 FASTKD3Q14CZ7 662 aaKnown RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 SIX1Q15475 284 aaPredicted RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 C11orf63Q6NUN7 778 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 ANKMY2Q8IV38 441 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 TMEM117Q9H0C3 514 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 GYG2O15488 501 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 LMNAP02545 664 aaKnown RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 ITIH2P19823 946 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 CPA2P48052 419 aa14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
PCDHB3-201ENST00000231130 COG7P83436 770 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms