RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 CENPKQ9BS16 269 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 SPON2Q9BUD6 331 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 FAM49BQ9NUQ9 324 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 SENP1Q9P0U3 644 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.31
HDAC5-201ENST00000225983 PPP1R12AO14974 1030 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 PIGHQ14442 188 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 ARHGEF6Q15052 776 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 GPAT2Q6NUI2 795 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 SLC26A7Q8TE54 656 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 CASKIN2Q8WXE0 1202 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 NAGPAQ9UK23 515 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 IRAK1P51617 712 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 TPI1P60174 286 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 HERVK_113P62684 666 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 ZBTB18Q99592 522 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 TARS2Q9BW92 718 aaKnown RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 GPRC5CQ9NQ84 441 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 ZC3H7BQ9UGR2 993 aaKnown RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 AGBL2Q5U5Z8 902 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 TRIM65Q6PJ69 517 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 ACER1Q8TDN7 264 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 PLEKHA5Q9HAU0 1116 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 MARCOQ9UEW3 520 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 UBA6A0AVT1 1052 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 AP2B1P63010 937 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 SLC29A2Q14542 456 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 SEZ6Q53EL9 994 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 CYP4A22Q5TCH4 519 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 GCNAQ96QF7 691 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 MAGEB5Q9BZ81 275 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 SMG5Q9UPR3 1016 aaKnown RBP17.01■□□□□ 0.31
HDAC5-201ENST00000225983 PXDNQ92626 1479 aa17.01■□□□□ 0.31
HDAC5-201ENST00000225983 TMEM120BA0PK00 339 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 EXTL3O43909 919 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 ENO1P06733 434 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 CUL3Q13618 768 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 KYAT1Q16773 422 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 BARGINQ6ZT62 677 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 GIPC2Q8TF65 315 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 ABTB1Q969K4 478 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 ARHGEF26Q96DR7 871 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 TSC22D3Q99576 134 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 WDR35Q9P2L0 1181 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 JCADQ9P266 1359 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 IGSF9BQ9UPX0 1349 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 FOXN3O00409 490 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 HADHAP40939 763 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 FASTKD5Q7L8L6 764 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 UBA3Q8TBC4 463 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 LACRTQ9GZZ8 138 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 NDE1Q9NXR1 346 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 C19orf81C9J6K1 198 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 CCDC22O60826 627 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 RARBP10826 455 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 RALAP11233 206 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 HSD17B3P37058 310 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 CDK17Q00537 523 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 C2CD6Q53TS8 623 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 APPL2Q8NEU8 664 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 MDM1Q8TC05 714 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 PSMC3IPQ9P2W1 217 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 TBX20Q9UMR3 447 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 MAGEA4P43358 317 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 COILP38432 576 aaPredicted RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 PLA2G4AP47712 749 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 PMS1P54277 932 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 USP33Q8TEY7 942 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 HNRNPLLQ8WVV9 542 aaKnown RBP17■□□□□ 0.31
HDAC5-201ENST00000225983 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 OSBPL1AQ9BXW6 950 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 WWP1Q9H0M0 922 aa17■□□□□ 0.31
HDAC5-201ENST00000225983 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC5-201ENST00000225983 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 FAM47DPA6NHR8 397 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 E5RI56 91 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 P4HA2O15460 535 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 CST8O60676 142 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 SGPL1O95470 568 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 EFTUD2Q15029 972 aaKnown RBP eCLIP16.99■□□□□ 0.317e-7■■■■■ 28.7
HDAC5-201ENST00000225983 URGCPQ8TCY9 931 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
HDAC5-201ENST00000225983 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms