RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Jak2Q62120 1129 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Pabpc4Q6PHQ9 660 aaKnown RBP13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 E2f7Q6S7F2 904 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Clic6Q8BHB9 596 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mical2Q8BML1 960 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Csgalnact2Q8C1F4 542 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Rbm41Q8JZV4 413 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Hps3Q91VB4 1002 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Sfmbt1Q9JMD1 863 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mettl1Q9Z120 268 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gbf1Q6DFZ1 1861 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Zfhx2Q2MHN3 2562 aa13.23□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 CitP49025 2055 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Vwa8Q8CC88 1905 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Lcmt1A0A0U1RNF2 332 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 4932429P05RikA2ADI4 785 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Slc4a11A2AJN7 862 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Herc3A6H6S0 1050 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 AlyrefO08583 255 aaKnown RBP13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 KlO35082 1014 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Dapk3O54784 448 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm5571P01639 130 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ass1P16460 412 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Kif3aP28741 701 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Tnfrsf4P47741 272 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cpne7Q0VE82 557 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 R3hdm4Q4VBF2 262 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Grhl3Q5FWH3 603 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 RetsatQ64FW2 609 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Rftn1Q6A0D4 554 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Asic1Q6NXK8 526 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prrt3Q6PE13 971 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Atp1a3Q6PIC6 1013 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Nap1l3Q794H2 544 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Aggf1Q7TN31 711 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Olfr389Q7TRX7 312 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Clec16aQ80U30 1036 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prss50Q8BLH5 439 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ccdc169Q8BXX9 214 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Slc41a2Q8BYR8 573 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Taf2Q8C176 1104 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Hgh1Q8C3I8 393 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Reep2Q8VCD6 254 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Olfr348Q8VGK3 313 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Pcdhb18Q91Y02 792 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prpf6Q91YR7 941 aaKnown RBP13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Ggt7Q99JP7 662 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Haus2Q9CQS9 234 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 TarsQ9D0R2 722 aaKnown RBP13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Mgat4dQ9D4R2 373 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Il17rbQ9JIP3 499 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Prl2c5Q9JLV9 222 aa13.22□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gm9573F7C950 1606 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Vmn2r79E9Q067 851 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Cyth3O08967 399 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 BhmtO35490 407 aaKnown RBP13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 AlbP07724 608 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Upp1P52624 311 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Slc12a1P55014 1095 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Trim43cP86449 446 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Otop2Q80SX5 563 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gpr62Q80UC6 358 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 C2cd2lQ80X80 706 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 BoraQ8BS90 525 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Caps2Q8BUG5 550 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Robo4Q8C310 1012 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Usp29Q9ES63 869 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Gtf2ird1Q9JI57 1104 aaKnown RBP13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Smarcb1Q9Z0H3 385 aa13.21□□□□□ -0.29
Ccdc28b-202ENSMUST00000106035 Arid2E9Q7E2 1828 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Atg2aQ6P4T0 1914 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Gm11758A2BEI6 360 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Gm11757A2BEI8 360 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Bpifb4A2BGH0 617 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Skint8A7XV07 398 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Calhm3J3QMI4 347 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Usp35M0QWN7 1009 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Prl6a1O35257 230 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 RaxO35602 342 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Mllt10O54826 1068 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Fgf13P70377 245 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Ppp1r12cQ3UMT1 782 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Sun3Q5SS91 320 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Pla2g4cQ64GA5 597 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Tas2r125Q7M710 311 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Tas2r115Q7M719 310 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Polr2eQ80UW8 210 aaKnown RBP13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Q8BGN9 141 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Wdr35Q8BND3 1181 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 D8Ertd738eQ8R1F0 94 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Nxnl1Q8VC33 217 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Acsf2Q8VCW8 615 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Psmd2Q8VDM4 908 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 CarfQ8VHI4 689 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Rxfp2Q91ZZ5 737 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Chst12Q99LL3 419 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Dpysl5Q9EQF6 564 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 NckipsdQ9ESJ4 714 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Clcn5Q9WVD4 746 aa13.2□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms