RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Taf4bG5E8Z2 855 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Fgf15O35622 218 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Banf1O54962 89 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 UgcgO88693 394 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rag1P15919 1040 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cst8P32766 142 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ptk2P34152 1090 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Thumpd3P97770 505 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 CcnjlQ5SRT8 387 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mapk4Q6P5G0 583 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pwp2Q8BU03 919 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lonp1Q8CGK3 949 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 PpatQ8CIH9 517 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ergic2Q9CR89 377 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Polr3cQ9D483 533 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sh2b2Q9JID9 621 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nr1h3Q9Z0Y9 445 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Abcb5B5X0E4 1255 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Klrk1O54709 232 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ccnd2P30280 289 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Wnt10bP48614 389 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ugt1a2P70691 533 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Gspt2Q149F3 632 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zfp953Q3UPV7 304 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Klra7Q60654 280 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Klra3Q64329 266 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tarsl2Q8BLY2 790 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 D630039A03RikQ8K0M7 236 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pdik1lQ8QZR7 341 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Lman1lQ8VCD3 505 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Spns2Q91VM4 549 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Cdk5rap3Q99LM2 503 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 StambpQ9CQ26 424 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Sppl3Q9CUS9 384 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Dnajb7Q9QYI8 312 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc22a3Q9WTW5 551 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Kat6bQ8BRB7 1872 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Serpina3iD3Z450 408 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 PtproE9Q612 1226 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Phactr4Q501J7 694 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pick1Q62083 416 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Nuak1Q641K5 658 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Styk1Q6J9G1 429 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ankzf1Q80UU1 748 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Znf618Q80YY7 953 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Tasp1Q8R1G1 420 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 RnpepQ8VCT3 650 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rpa1Q8VEE4 623 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ccdc65Q8VHI7 493 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Anapc4Q91W96 807 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Rpn1Q91YQ5 608 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Slc13a1Q9JHI4 594 aa10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 PygmQ9WUB3 842 aaKnown RBP10.28□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Apol8A2VDH7 339 aaKnown RBP10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Atp11aP98197 1187 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ogfod1Q3U0K8 545 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Hsph1Q61699 858 aaKnown RBP10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Pla2g4cQ64GA5 597 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Siglec10Q80ZE3 688 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Chmp2bQ8BJF9 213 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Ugt3a2Q8JZZ0 523 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Klhl36Q8R124 613 aa10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Mrps9Q9D7N3 390 aaKnown RBP10.27□□□□□ -0.76
Pcdh1-201ENSMUST00000057185 Zfp212G3X8R7 492 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 PrkceP16054 737 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cav1P49817 178 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Epb41l4aP52963 686 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Npr3P70180 536 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tgfbrap1Q3UR70 860 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Znf354cQ571J5 560 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tmc8Q7TN58 722 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zswim5Q80TC6 1188 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ccdc159Q8C963 411 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Stxbp5Q8K400 1152 aaKnown RBP10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Grhl1Q921D9 618 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Serpinb3bQ9D1Q5 387 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tcirg1Q9JHF5 834 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Fam205a1D3YZF6 1314 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm9774A0A0A6YVU8 407 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tbc1d16A2ABG4 766 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Serpinb3cA2RSF9 386 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Fam47eD3YWC7 402 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zfp94E9Q6Y4 486 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm15448F6PZL4 682 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cdc25cP48967 447 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Hipk4Q3V016 616 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Atl2Q6PA06 583 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gpatch2lQ6PE65 482 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rnf139Q7TMV1 668 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Raver2Q7TPD6 673 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 OafQ8QZR4 282 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trim60Q8VI40 466 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rhobtb2Q91V93 728 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nek8Q91ZR4 698 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rnaseh2aQ9CWY8 301 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Abt1Q9QYL7 269 aaKnown RBP10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Net1Q9Z206 595 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 RptorQ8K4Q0 1335 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm15262A0A140LIQ5 728 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ets2P15037 468 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms