RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TOB1P50616 345 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 RAB33AQ14088 237 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 LEO1Q8WVC0 666 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 DDX27Q96GQ7 796 aaKnown RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 NAP1L4Q99733 375 aaKnown RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 TMEM60Q9H2L4 133 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 FZD8Q9H461 694 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 PRMT7Q9NVM4 692 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 MTRRQ9UBK8 725 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 MRPS23Q9Y3D9 190 aaKnown RBP11.01□□□□□ -0.65
PHGDH-222ENST00000641587 CDY1Q9Y6F8 540 aa11.01□□□□□ -0.65
PHGDH-222ENST00000641587 TICRRQ7Z2Z1 1910 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 N4BP3O15049 544 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 NEMFO60524 1076 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 LILRB5O75023 590 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 MED24O75448 989 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 YEATS4O95619 227 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 BMP15O95972 392 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 PRKCBP05771 671 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 RHOP08100 348 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 FGFR3P22607 806 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 FCARP24071 287 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 MCM4P33991 863 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 BRCC3P46736 316 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 ME1P48163 572 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 NASPP49321 788 aaPredicted RBP11□□□□□ -0.65
PHGDH-222ENST00000641587 CLCNKBP51801 687 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 PFKPQ01813 784 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 FZD5Q13467 585 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
PHGDH-222ENST00000641587 GRM2Q14416 872 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 LPAL2Q16609 132 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 FAM187BQ17R55 369 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 ZBTB41Q5SVQ8 909 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 TANGO2Q6ICL3 276 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 CEP120Q8N960 986 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 ATRIPQ8WXE1 791 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 NELL1Q92832 810 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 TCEAL4Q96EI5 215 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 PRIMPOLQ96LW4 560 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 MTMR9Q96QG7 549 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 OSBPL6Q9BZF3 934 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 CCDC113Q9H0I3 377 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 EPC1Q9H2F5 836 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 PARD6AQ9NPB6 346 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 EIF4ENIF1Q9NRA8 985 aaKnown RBP11□□□□□ -0.65
PHGDH-222ENST00000641587 ZSCAN32Q9NX65 697 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 NDRG2Q9UN36 371 aaKnown RBP11□□□□□ -0.65
PHGDH-222ENST00000641587 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 F5P12259 2224 aa11□□□□□ -0.65
PHGDH-222ENST00000641587 DCDC2BA2VCK2 349 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 SPTLC2O15270 562 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 PRPF40AO75400 957 aaKnown RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 B3GAT3O94766 335 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 POU2F2P09086 479 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 TGM1P22735 817 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 MARCKSP29966 332 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 ROR1Q01973 937 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 SOX4Q06945 474 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 ELAVL2Q12926 359 aaKnown RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 MTAPQ13126 283 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 CLDN23Q96B33 292 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 PPP1R10Q96QC0 940 aaKnown RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 PRMT8Q9NR22 394 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-222ENST00000641587 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 USP18Q9UMW8 372 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 NCANO14594 1321 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 EPG5Q9HCE0 2579 aa10.99□□□□□ -0.65
PHGDH-222ENST00000641587 WDR27A2RRH5 827 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 TMEM189-UBE2V1I3L0A0 370 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ECI2O75521 394 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 CCR2P41597 374 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ARPP19P56211 112 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 PTGDRQ13258 359 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-222ENST00000641587 SLC39A14Q15043 492 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 NFKBIBQ15653 356 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 MAPK6Q16659 721 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 UVSSAQ2YD98 709 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 PRSS36Q5K4E3 855 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 NT5DC1Q5TFE4 455 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 PDXDC1Q6P996 788 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 TMEM130Q8N3G9 435 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 MCPH1Q8NEM0 835 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 CORO1BQ9BR76 489 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 C2orf40Q9H1Z8 148 aa10.98□□□□□ -0.65
PHGDH-222ENST00000641587 RCOR1Q9UKL0 485 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms