RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 MED15Q96RN5 788 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 RAD9AQ99638 391 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 COLEC11Q9BWP8 271 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 TBC1D13Q9NVG8 400 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 AGAP1Q9UPQ3 857 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
PHGDH-220ENST00000641570 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 DGKIO75912 1065 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 ALDH2P05091 517 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 PAX3P23760 479 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 ATICP31939 592 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 RGS19P49795 217 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 TAF6P49848 677 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 EPHB4P54760 987 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
PHGDH-220ENST00000641570 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
PHGDH-220ENST00000641570 RAB30Q15771 203 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 NEK11Q8NG66 645 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 TAF4BQ92750 862 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 C18orf25Q96B23 403 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 NT5C1BQ96P26 610 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 CASD1Q96PB1 797 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 TMEM175Q9BSA9 504 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 RAB20Q9NX57 234 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
PHGDH-220ENST00000641570 GTPBP10A4D1E9 387 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PTGESO14684 152 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 TADA2AO75478 443 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 B3GAT3O94766 335 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PPM1AP35813 382 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PPP3CAQ08209 521 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 ZACNQ401N2 412 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 XKR4Q5GH76 650 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF667Q5HYK9 610 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PPFIBP1Q86W92 1011 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 IRF2BP1Q8IU81 584 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 IQCDQ96DY2 449 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 HPDLQ96IR7 371 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PPP1R10Q96QC0 940 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 INTS2Q9H0H0 1204 aaKnown RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 RNF19AQ9NV58 838 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 CXXC1Q9P0U4 656 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PCDH10Q9P2E7 1040 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
PHGDH-220ENST00000641570 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-220ENST00000641570 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 INPPL1O15357 1258 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 HUS1O60921 280 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 RFX1P22670 979 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 TBXAS1P24557 533 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CA8P35219 290 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 GATMP50440 423 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CLDN10P78369 228 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 KRT17Q04695 432 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 ELAVL2Q12926 359 aaKnown RBP13.93□□□□□ -0.18
PHGDH-220ENST00000641570 TRIM14Q14142 442 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 SHHQ15465 462 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CBWD6Q4V339 395 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CBWD3Q5JTY5 395 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CBWD5Q5RIA9 395 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 FMNL3Q8IVF7 1028 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 TDHQ8IZJ6 230 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
PHGDH-220ENST00000641570 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
PHGDH-220ENST00000641570 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
PHGDH-220ENST00000641570 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■□□□□ 10.9
PHGDH-220ENST00000641570 ALPK3Q96L96 1907 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
PHGDH-220ENST00000641570 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-220ENST00000641570 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms