RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 BARHL2Q9NY43 387 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 GIT1Q9Y2X7 761 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 COL4A3BPQ9Y5P4 624 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 CACNA1EQ15878 2313 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 ARID2Q68CP9 1835 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 NAV2Q8IVL1 2488 aa9.05□□□□□ -0.96
SCARB2-226ENST00000640916 SF3B1O75533 1304 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCARB2-226ENST00000640916 MYO16Q9Y6X6 1858 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
SCARB2-226ENST00000640916 MYBPHLA2RUH7 354 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 HIP1O00291 1037 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 TRIM66O15016 1216 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 TSPAN1O60635 241 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 NR1I2O75469 434 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 MICAL2O94851 1124 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 SRGAP2CP0DJJ0 459 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 PTPN2P17706 415 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 AKAP5P24588 427 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 LRRC32Q14392 662 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 HSP90AA2PQ14568 343 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-226ENST00000640916 NAB2Q15742 525 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 DGKKQ5KSL6 1271 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 CD300LGQ6UXG3 332 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 CEP57Q86XR8 500 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 MFSD6LQ8IWD5 586 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 DEFB124Q8NES8 71 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 PRPF31Q8WWY3 499 aaKnown RBP9.04□□□□□ -0.96
SCARB2-226ENST00000640916 SLC5A5Q92911 643 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 SMARCD2Q92925 531 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 TMEM134Q9H6X4 195 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 TRPV4Q9HBA0 871 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 POLR3BQ9NW08 1133 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-226ENST00000640916 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 MTRRQ9UBK8 725 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 SHROOM3Q8TF72 1996 aa9.04□□□□□ -0.96
SCARB2-226ENST00000640916 PTPRDP23468 1912 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 KIAA1549LQ6ZVL6 1849 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
SCARB2-226ENST00000640916 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 SLC38A8A6NNN8 435 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 SPECC1L-ADORA2AF8WAN1 911 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 ZNF263O14978 683 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CHMP2AO43633 222 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 PRC1O43663 620 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 PSMD10O75832 226 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 AKAP3O75969 853 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CALM1P0DP23 149 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CALM2P0DP24 149 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CALM3P0DP25 149 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 FGFR3P22607 806 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 SFNP31947 248 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CTHP32929 405 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 LIFRP42702 1097 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 LAMTOR4Q0VGL1 99 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 GRIK3Q13003 919 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 HDAC1Q13547 482 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-226ENST00000640916 PLA2G4FQ68DD2 849 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 EXOC6Q8TAG9 804 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 DEPDC1BQ8WUY9 529 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 TMEM143Q96AN5 459 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 LRRC3BQ96PB8 259 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 RIT2Q99578 217 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 APOL6Q9BWW8 343 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 CSRNP2Q9H175 543 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 DHX33Q9H6R0 707 aaKnown RBP9.03□□□□□ -0.96
SCARB2-226ENST00000640916 ANKFY1Q9P2R3 1169 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 V9GY48 417 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-226ENST00000640916 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
SCARB2-226ENST00000640916 PI4KAP42356 2102 aa9.02□□□□□ -0.96
SCARB2-226ENST00000640916 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.96
SCARB2-226ENST00000640916 ADAMTS9Q9P2N4 1935 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 CASTOR2A6NHX0 329 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 CCDC69A6NI79 296 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 DDX11L8A8MPP1 907 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 HEPACAM2A8MVW5 462 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 PATE3B3GLJ2 98 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 PTGESO14684 152 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 DCLK1O15075 740 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 ABLIM3O94929 683 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 CAVIN2O95810 425 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 CCDC192P0DO97 292 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 GJA1P17302 382 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 JAK3P52333 1124 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 NPEPPSP55786 919 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 SPIRE1Q08AE8 756 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 TUSC3Q13454 348 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 PON2Q15165 354 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 TMTC2Q8N394 836 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 MSANTD3Q96H12 275 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
SCARB2-226ENST00000640916 CORO1BQ9BR76 489 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 C8orf33Q9H7E9 229 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-226ENST00000640916 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 WRAP73Q9P2S5 460 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-226ENST00000640916 TCEAL9Q9UHQ7 104 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms