RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 CCDC6Q16204 474 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 UVSSAQ2YD98 709 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 PSAPL1Q6NUJ1 521 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 LRSAM1Q6UWE0 723 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 ANO5Q75V66 913 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 GAS2L3Q86XJ1 694 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 SPEM1Q8N4L4 309 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 PRPF31Q8WWY3 499 aaKnown RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 PIK3R5Q8WYR1 880 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 TTPALQ9BTX7 342 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 TRMT61BQ9BVS5 477 aaKnown RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 LSM14BQ9BX40 385 aaKnown RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 GIT1Q9Y2X7 761 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 ADAM12O43184 909 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 RHOP08100 348 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 CHRNB1P11230 501 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 GNL2Q13823 731 aaKnown RBP15.13■□□□□ 0.01
HLA-C-210ENST00000640219 PKP1Q13835 747 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 HSP90AA2PQ14568 343 aaPredicted RBP15.13■□□□□ 0.01
HLA-C-210ENST00000640219 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
HLA-C-210ENST00000640219 FAM171A1Q5VUB5 890 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 PSPC1Q8WXF1 523 aaKnown RBP15.13■□□□□ 0.01
HLA-C-210ENST00000640219 IRF7Q92985 503 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 LXNQ9BS40 222 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 PIAS3Q9Y6X2 628 aa15.13■□□□□ 0.01
HLA-C-210ENST00000640219 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
HLA-C-210ENST00000640219 TMEM8BA6NDV4 472 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 K7ESF4 209 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 CEBPBP17676 345 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 FCARP24071 287 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 AXLP30530 894 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 TOB1P50616 345 aaPredicted RBP15.12■□□□□ 0.01
HLA-C-210ENST00000640219 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
HLA-C-210ENST00000640219 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 GRIK3Q13003 919 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 SLC5A9Q2M3M2 681 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 NOTUMQ6P988 496 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 POTEHQ6S545 545 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 HACE1Q8IYU2 909 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 GSTCDQ8NEC7 633 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 HASPINQ8TF76 798 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 PPP1R9BQ96SB3 815 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 TRIM6Q9C030 488 aaPredicted RBP15.12■□□□□ 0.01
HLA-C-210ENST00000640219 CSRNP2Q9H175 543 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 TTC12Q9H892 705 aaPredicted RBP15.12■□□□□ 0.01
HLA-C-210ENST00000640219 ZFP14Q9HCL3 533 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
HLA-C-210ENST00000640219 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 LHX6Q9UPM6 363 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
HLA-C-210ENST00000640219 F5P12259 2224 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 SRRM3A6NNA2 597 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 TSPAN1O60635 241 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 AKAP5P24588 427 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 GDI1P31150 447 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 CLCN1P35523 988 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PSMC5P62195 406 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 RING1Q06587 406 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 FOXC1Q12948 553 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PTGDRQ13258 359 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 RAB33AQ14088 237 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 TTC38Q5R3I4 469 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 FOXD4L5Q5VV16 416 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PDXDC1Q6P996 788 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 RTL10Q7L3V2 364 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 MAP4K3Q8IVH8 894 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 NOSTRINQ8IVI9 506 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 TPH2Q8IWU9 490 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 EXOC8Q8IYI6 725 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 RNF149Q8NC42 400 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 FOXD4L4Q8WXT5 416 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 EIF2AK1Q9BQI3 630 aaKnown RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PAAF1Q9BRP4 392 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 FOXP1Q9H334 677 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 NXF3Q9H4D5 531 aaKnown RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 TRPV5Q9NQA5 729 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 AVENQ9NQS1 362 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-210ENST00000640219 PCDHB6Q9Y5E3 794 aa15.11■□□□□ 0.01
HLA-C-210ENST00000640219 GREB1Q4ZG55 1949 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 ESPNB1AK53 854 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 TBX3O15119 743 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 SPINK2P20155 84 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 CCNE1P24864 410 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 OR1D2P34982 312 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 QARSP47897 775 aaKnown RBP15.1■□□□□ 0.01
HLA-C-210ENST00000640219 LRRC32Q14392 662 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 EPHA7Q15375 998 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 FAM78AQ5JUQ0 283 aa15.1■□□□□ 0.01
HLA-C-210ENST00000640219 WDR5BQ86VZ2 330 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms