RNA–Protein interactions for RNA: ENST00000638366.1

KCNC1-205, Transcript of potassium voltage-gated channel subfamily C member 1, human

TSL 5

Gene KCNC1, Length 660 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNC1-205	ENST00000638366	PDZD7	Q9H5P4	517 aa		11.44	□□□□□ -0.58
KCNC1-205	ENST00000638366	ANKEF1	Q9NU02	776 aa		11.44	□□□□□ -0.58
KCNC1-205	ENST00000638366	HCFC1R1	Q9NWW0	138 aa		11.44	□□□□□ -0.58
KCNC1-205	ENST00000638366	KCNH3	Q9ULD8	1083 aa		11.44	□□□□□ -0.58
KCNC1-205	ENST00000638366	MTF2	Q9Y483	593 aa	Predicted RBP	11.44	□□□□□ -0.58
KCNC1-205	ENST00000638366	HELZ	P42694	1942 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	VWA3A	A6NCI4	1184 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	TMEM189-UBE2V1	I3L0A0	370 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	TDGF1	P13385	188 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	CDC25A	P30304	524 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	ANP32A	P39687	249 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	RPS9	P46781	194 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	NASP	P49321	788 aa	Predicted RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	LMNB2	Q03252	620 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	ELAVL2	Q12926	359 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	PDIA5	Q14554	519 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	ECM1	Q16610	540 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	SLC5A9	Q2M3M2	681 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	PABPC1L	Q4VXU2	614 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	SLC44A4	Q53GD3	710 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	PDXDC1	Q6P996	788 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	CATSPER3	Q86XQ3	398 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	TPH2	Q8IWU9	490 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	GPR161	Q8N6U8	529 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	CHAMP1	Q96JM3	812 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	CCDC43	Q96MW1	224 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	MMTAG2	Q9BU76	263 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	ZSCAN32	Q9NX65	697 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	TFIP11	Q9UBB9	837 aa	Known RBP	11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	MTRR	Q9UBK8	725 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	LRWD1	Q9UFC0	647 aa		11.43	□□□□□ -0.58
KCNC1-205	ENST00000638366	CNOT1	A5YKK6	2376 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366		A0A087WWV3	80 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	LRRIQ4	A6NIV6	560 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	SHISA7	A6NL88	538 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	FAM170B	A6NMN3	283 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	TTLL13P	A6NNM8	815 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	USO1	O60763	962 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	ECI2	O75521	394 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	BMP15	O95972	392 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	EDN1	P05305	212 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	CD72	P21854	359 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	SDHB	P21912	280 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	FGFR3	P22607	806 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	FCAR	P24071	287 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	RPA1	P27694	616 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	MARCKS	P29966	332 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	CSTF1	Q05048	431 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	RAB33A	Q14088	237 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	FAM187B	Q17R55	369 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	ING5	Q8WYH8	240 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	DNASE1L2	Q92874	299 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	DDX27	Q96GQ7	796 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	CXCL16	Q9H2A7	254 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	TUFT1	Q9NNX1	390 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	GPRC5C	Q9NQ84	441 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	DAXX	Q9UER7	740 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	PARP2	Q9UGN5	583 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	FBXO2	Q9UK22	296 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	CDV3	Q9UKY7	258 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	POLI	Q9UNA4	740 aa		11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	RBM19	Q9Y4C8	960 aa	Known RBP	11.42	□□□□□ -0.58
KCNC1-205	ENST00000638366	N4BP3	O15049	544 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	TH	P07101	528 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	CEBPB	P17676	345 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	TGM1	P22735	817 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	DNM1	Q05193	864 aa	Known RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	SLC39A14	Q15043	492 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	UVSSA	Q2YD98	709 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ZBTB41	Q5SVQ8	909 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	RTL10	Q7L3V2	364 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	CEP57	Q86XR8	500 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ZBTB8OS	Q8IWT0	167 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ZNF687	Q8N1G0	1237 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	LINC00301	Q8NCQ3	95 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ERMN	Q8TAM6	284 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	SNX29	Q8TEQ0	813 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ATRIP	Q8WXE1	791 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	ZNF396	Q96N95	335 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	CLIC6	Q96NY7	704 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	PNMA5	Q96PV4	448 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	RAB34	Q9BZG1	259 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	CCDC113	Q9H0I3	377 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	FZD8	Q9H461	694 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	PARD6A	Q9NPB6	346 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	AVEN	Q9NQS1	362 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	SNTG2	Q9NY99	539 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	GDE1	Q9NZC3	331 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	DNMT3B	Q9UBC3	853 aa	Known RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	CDY1	Q9Y6F8	540 aa		11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNC1-205	ENST00000638366	NUP205	Q92621	2012 aa		11.4	□□□□□ -0.58
KCNC1-205	ENST00000638366	PRR5-ARHGAP8	B1AHC4	643 aa		11.4	□□□□□ -0.58
KCNC1-205	ENST00000638366	KRT37	O76014	449 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms