RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 RRM1P23921 792 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 BNIP1Q12981 228 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 KLF1Q13351 362 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 CCDC89Q8N998 374 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 POMGNT1Q8WZA1 660 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 NTPCRQ9BSD7 190 aaKnown RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 ECT2Q9H8V3 914 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 C17orf75Q9HAS0 396 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 C1orf112Q9NSG2 853 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 PCDHB2Q9Y5E7 798 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 MYPNQ86TC9 1320 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 KRT76Q01546 638 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 CCNG2Q16589 344 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 SLC39A4Q6P5W5 647 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 SYTL5Q8TDW5 730 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 CCDC77Q9BR77 488 aa21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 DNAJC17Q9NVM6 304 aaKnown RBP21.41■■□□□ 1.02
SYNGAP1-227ENST00000638142 PSTPIP1O43586 416 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 PROSCO94903 275 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 IBSPP21815 317 aaPredicted RBP21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 PSEN1P49768 467 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 BPIFB4P59827 614 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 COPS2P61201 443 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 STAT4Q14765 748 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZNF365Q70YC5 407 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 GPD1LQ8N335 351 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 MAGEB18Q96M61 343 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 EBF2Q9HAK2 575 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 PRKAG3Q9UGI9 489 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 R3HDM2Q9Y2K5 976 aaKnown RBP21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 A0A1B0GUA9 196 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 STX2P32856 288 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 NSFP46459 744 aaKnown RBP21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 MPP2Q14168 576 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 PPP1R21Q6ZMI0 780 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 CEP128Q6ZU80 1094 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 FLAD1Q8NFF5 587 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 TGS1Q96RS0 853 aaKnown RBP21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 RXFP1Q9HBX9 757 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 NKIRAS1Q9NYS0 192 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 EP400Q96L91 3159 aa21.4■■□□□ 1.02
SYNGAP1-227ENST00000638142 RALAP11233 206 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 ALADP13716 330 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 DLGAP5Q15398 846 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 TRMT1LQ7Z2T5 733 aaKnown RBP21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 SUPT20HQ8NEM7 779 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 GDAP1Q8TB36 358 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 CPA5Q8WXQ8 436 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 FAM212AQ96EL1 285 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 IFT74Q96LB3 600 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 FOXP3Q9BZS1 431 aa21.39■■□□□ 1.02
SYNGAP1-227ENST00000638142 CCNE2O96020 404 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 CYP1A1P04798 512 aaPredicted RBP21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 GARTP22102 1010 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 STRN3Q13033 797 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 PGM5Q15124 567 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 SPDYE2Q495Y8 402 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 RHOT1Q8IXI2 618 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 RIBC1Q8N443 379 aaPredicted RBP21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 CNKSR1Q969H4 720 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 PI4K2AQ9BTU6 479 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 MLXIPLQ9NP71 852 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 NAALADL1Q9UQQ1 740 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 UMODL1Q5DID0 1318 aa21.39■■□□□ 1.01
SYNGAP1-227ENST00000638142 GH1P01241 217 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 ASNSP08243 561 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 CHRM1P11229 460 aaPredicted RBP21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 EIF2AK2P19525 551 aaKnown RBP21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 CLNS1AP54105 237 aaKnown RBP21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 KCNJ2P63252 427 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 C15orf39Q6ZRI6 1047 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 ANO5Q75V66 913 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 MON1BQ7L1V2 547 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 CYP4X1Q8N118 509 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 RDM1Q8NG50 284 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 ELMO3Q96BJ8 720 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 GRAMD1AQ96CP6 724 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 TBC1D31Q96DN5 1066 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 GGT7Q9UJ14 662 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 CALCAP01258 141 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 ABHD2P08910 425 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 VPS41P49754 854 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 BRDTQ58F21 947 aaPredicted RBP21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 LIN9Q5TKA1 542 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 FKBP1CQ5VVH2 108 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 KATNAL2Q8IYT4 538 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 BSNDQ8WZ55 320 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 KLHL29Q96CT2 875 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 EURLQ9NYK6 297 aa21.38■■□□□ 1.01
SYNGAP1-227ENST00000638142 HNRNPDLO14979 420 aaKnown RBP21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 ATP9AO75110 1047 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 SLC8A3P57103 927 aa21.37■■□□□ 1.01
SYNGAP1-227ENST00000638142 IZUMO3Q5VZ72 239 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms