RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RCOR2Q8IZ40 523 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 PTPRN2Q92932 1015 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 FAM32AQ9Y421 112 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 MAN1A2O60476 641 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 KRT4P19013 534 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 PTRHD1Q6GMV3 140 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 GLB1LQ6UWU2 654 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 COG1Q8WTW3 980 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 LPAR1Q92633 364 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 NOP53Q9NZM5 478 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 CD274Q9NZQ7 290 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 XPO7Q9UIA9 1087 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 KDM6BO15054 1643 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 TARSL2A2RTX5 802 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ZNF189O75820 626 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 CUL3Q13618 768 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 NBPF10Q6P3W6 841 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 YY1AP1Q9H869 796 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ARHGEF38Q9NXL2 777 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 GMNCA6NCL1 334 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 GRIN1Q05586 938 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 DGKDQ16760 1214 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SV2CQ496J9 727 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SLC7A14Q8TBB6 771 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SPATA16Q9BXB7 569 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 POLR1AO95602 1720 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 BAZ2BQ9UIF8 2168 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SUPT3HB4E1H0 165 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 DCAF6Q58WW2 860 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 GLI2P10070 1586 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 CPT1AP50416 773 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SHCBP1Q8NEM2 672 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 BHMTQ93088 406 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 GPR63Q9BZJ6 419 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 HDAC4P56524 1084 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ABCE1P61221 599 aaKnown RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ANO5Q75V66 913 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SLC25A41Q8N5S1 370 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 NDE1Q9NXR1 346 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ESYT3A0FGR9 886 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 EEF2KO00418 725 aaKnown RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SEC24DO94855 1032 aaPredicted RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 MMS22LQ6ZRQ5 1243 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 PDGFRAP16234 1089 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SLC1A1P43005 524 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 FOXO4P98177 505 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ZSCAN32Q9NX65 697 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 CCDC22O60826 627 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 LRG1P02750 347 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ETFBP38117 255 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 PIGHQ14442 188 aaPredicted RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 TSPAN17Q96FV3 270 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
SHPRH-211ENST00000629427 ZNF556Q9HAH1 456 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 SLC25A13Q9UJS0 675 aa12.34□□□□□ -0.43
SHPRH-211ENST00000629427 DGAT1O75907 488 aa12.33□□□□□ -0.43
SHPRH-211ENST00000629427 SREBF2Q12772 1141 aa12.33□□□□□ -0.43
SHPRH-211ENST00000629427 TRADDQ15628 312 aa12.33□□□□□ -0.43
SHPRH-211ENST00000629427 FMR1NBQ8N0W7 255 aaPredicted RBP12.33□□□□□ -0.43
SHPRH-211ENST00000629427 ARHGAP26Q9UNA1 814 aa12.33□□□□□ -0.43
SHPRH-211ENST00000629427 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.43
SHPRH-211ENST00000629427 MAGEB2O15479 319 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 RCAN1P53805 252 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 TRIM48Q8IWZ4 208 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 PNMA6AP0CW24 399 aaPredicted RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 GNASQ5JWF2 1037 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 FBXO38Q6PIJ6 1188 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 SARM1Q6SZW1 724 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms