RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ITPKAP23677 461 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GGCXP38435 758 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ALDH7A1P49419 539 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 LMNB2Q03252 620 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 RNASELQ05823 741 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FAM160A1Q05DH4 1040 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 CAMK4Q16566 473 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 MIS18BP1Q6P0N0 1132 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ADAMTSL4Q6UY14 1074 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FAM228AQ86W67 206 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ENGASEQ8NFI3 743 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 OR13H1Q8NG92 308 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 FBXO27Q8NI29 283 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ATP8B4Q8TF62 1192 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM169Q96HH4 297 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM87BQ96K49 555 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF558Q96NG5 402 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 USP28Q96RU2 1077 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF577Q9BSK1 485 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 OXCT2Q9BYC2 517 aaPredicted RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 GOLPH3LQ9H4A5 285 aa5.36□□□□□ -1.55
LINC00550-201ENST00000629293 AGO4Q9HCK5 861 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 DBR1Q9UK59 544 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 MAP1BP46821 2468 aaKnown RBP5.36□□□□□ -1.55
LINC00550-201ENST00000629293 ATRXP46100 2492 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 NLRC5Q86WI3 1866 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 KLF18A0A0U1RQI7 1052 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 FAM86B1E9PN63 330 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 C2CD2LO14523 706 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 MAFGO15525 162 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 CAVIN2O95810 425 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 FAM86B2P0C5J1 330 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 GBP2P32456 591 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 GIPRP48546 466 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 SNW1Q13573 536 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 PLEKHG6Q3KR16 790 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ANO6Q4KMQ2 910 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 EFCAB12Q6NXP0 572 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 APOA5Q6Q788 366 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 BICD2Q8TD16 824 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 POMKQ9H5K3 350 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ERVK-5Q9HDB9 667 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 HCFC2Q9Y5Z7 792 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ZFYVE26Q68DK2 2539 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 GOLGA6L4A6NEF3 574 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 LOC730098B7Z3J9 87 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 C9IYK1 514 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 CXCL14O95715 111 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TPM3P06753 285 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 LAG3P18627 525 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TMOD1P28289 359 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 COASYQ13057 564 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 CAMK2GQ13555 558 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 SAMD5Q5TGI4 173 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TWF2Q6IBS0 349 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 PLPPR4Q7Z2D5 763 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 LUZP1Q86V48 1076 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 LPPQ93052 612 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF396Q96N95 335 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TTC12Q9H892 705 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 FBXL21Q9UKT6 434 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 PPT2Q9UMR5 302 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 NID2Q14112 1375 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ESYT3A0FGR9 886 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM150BA6NC51 233 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 C2CD4DB7Z1M9 353 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 RRP9O43818 475 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 FOSP01100 380 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 AKAP17AQ02040 695 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 IQCB1Q15051 598 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 DUSP6Q16828 381 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ANKRD54Q6NXT1 300 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 SYCE2Q6PIF2 218 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 SASS6Q6UVJ0 657 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF598Q86UK7 904 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 VPS52Q8N1B4 723 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 NME8Q8N427 588 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 KIAA1524Q8TCG1 905 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 MRPS27Q92552 414 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF830Q96NB3 372 aaPredicted RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TNKS2Q9H2K2 1166 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 RIC8AQ9NPQ8 531 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM161AQ9NX61 479 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 SPG21Q9NZD8 308 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 R3HCC1Q9Y3T6 440 aaKnown RBP5.35□□□□□ -1.55
LINC00550-201ENST00000629293 DNAH14Q0VDD8 3507 aa5.35□□□□□ -1.55
LINC00550-201ENST00000629293 GON4LQ3T8J9 2241 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 ANKRD11Q6UB99 2663 aaPredicted RBP5.34□□□□□ -1.55
LINC00550-201ENST00000629293 hCG_2014768A0A024R1R8 64 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 A0A1W2PNR3 127 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 A0A1W2PQ27 194 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 A0A1W2PQ64 194 aa5.34□□□□□ -1.55
LINC00550-201ENST00000629293 A0A1W2PQD8 194 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms