RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 DUSP12Q9UNI6 340 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 K7ENM7 598 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 SYN3O14994 580 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 TRAK2O60296 914 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 PIGRP01833 764 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 POU2F2P09086 479 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 CLTAP09496 248 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 CXCL8P10145 99 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 LAMP2P13473 410 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 FSHRP23945 695 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 LIG4P49917 911 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 PTPN5P54829 565 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 SPECC1Q5M775 1068 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
UBR1-212ENST00000627960 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 GET4Q7L5D6 327 aaPredicted RBP13.21□□□□□ -0.29
UBR1-212ENST00000627960 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.29
UBR1-212ENST00000627960 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
UBR1-212ENST00000627960 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
UBR1-212ENST00000627960 MYH15Q9Y2K3 1946 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 CCL16O15467 120 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TBC1D4O60343 1298 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 XYLBO75191 536 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TBCAO75347 108 aaKnown RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 ABCD1P33897 745 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TNFSF9P41273 254 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 NUBP1P53384 320 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 NTHL1P78549 312 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 GTF2BQ00403 316 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TCF15Q12870 199 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 MRPL58Q14197 206 aaKnown RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 KYAT1Q16773 422 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 ZNF461Q8TAF7 563 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 ZFP37Q9Y6Q3 630 aaPredicted RBP13.2□□□□□ -0.3
UBR1-212ENST00000627960 ANK1P16157 1881 aa13.2□□□□□ -0.3
UBR1-212ENST00000627960 A0A0B4J269 797 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 LACTBL1A8MY62 500 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 H7C4K7 107 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 OGTO15294 1046 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 NARSO43776 548 aaKnown RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 FAM189A1O60320 539 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ABLIM3O94929 683 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ADRB2P07550 413 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 CYP3A5P20815 502 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 LRPAP1P30533 357 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 MCM4P33991 863 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 CLCN5P51795 746 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ROR1Q01973 937 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 SPAG1Q07617 926 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 TMEM105Q8N8V8 129 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 KRI1Q8N9T8 703 aaKnown RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 DDX12PQ92771 950 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
UBR1-212ENST00000627960 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
UBR1-212ENST00000627960 STX6O43752 255 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 NPR3P17342 541 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 ARPP19P56211 112 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 PPP2R3AQ06190 1150 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 HTR4Q13639 388 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 ZC2HC1CQ53FD0 456 aaPredicted RBP13.18□□□□□ -0.3
UBR1-212ENST00000627960 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 TMEM130Q8N3G9 435 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
UBR1-212ENST00000627960 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms